Micromonospora musae (TISTR 2659, JCM 32149, DSM 118754)

Name: Micromonospora musae (TISTR 2659, JCM 32149, DSM 118754)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 164206

Type strain

Strain Designation MS1-9

Culture col. no. TISTR 2659 JCM 32149 DSM 118754 MS1-9

NCBI tax ID(s) 1894970

Special Collections JCM

History JCM <-- S. Tanasupawat; Chulalongkorn Univ., Thailand; MS1-9. DSMZ <- JCM; JCM 32149

Links

Micromonospora musae MS1-9 is a bacterium that was isolated from Roots of Musa cv. 'Kluai Namwa' from Chachoengsao Province.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 285512

DSM 118754,JCM 32149

@ref 20215

Last LPSN update 2026-05-29 08:45:21

Domain Bacteria

Phylum Actinomycetota

Class Actinomycetes

Order Micromonosporales

Family Micromonosporaceae

Genus Micromonospora

Species Micromonospora musae

Full scientific name Micromonospora musae Kuncharoen et al. 2021

BacDive ID	Other strains from **Micromonospora musae** (1)	Type strain
164207	M. musae JCM 32150

Morphology

Cell morphology

@ref	Motility	Confidence	Gram stain
125438		90.5
125439		97.878	positive

Multimedia

@ref:	126114
multimedia content:	DSM_118754.jpg
multimedia.multimedia content:	https://www.dsmz.de/microorganisms/photos/DSM_118754.jpg
caption:	Medium 554 28°C
intellectual property rights:	Leibniz-Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH
manual_annotation:	1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
126114	N-Z-AMINE-MEDIUM (DSMZ Medium 554)	Medium recipe at MediaDive	Name: N-Z-AMINE-MEDIUM (DSMZ Medium 554) Composition: Starch 20.0 g/l Agar 20.0 g/l Glucose 10.0 g/l N-Z amine 5.0 g/l Yeast extract 5.0 g/l CaCO3 1.0 g/l Distilled water
126114	YEAST-STARCH-AGAR(B) (DSMZ Medium 656)	Medium recipe at MediaDive	Name: YEAST-STARCH-AGAR(B) (DSMZ Medium 656) Composition: Starch 15.0 g/l Agar 15.0 g/l Yeast extract 4.0 g/l MgSO4 x 7 H2O 0.5 g/l K2HPO4 0.5 g/l Distilled water
126114	GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)	Medium recipe at MediaDive	Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 20.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	28
126114	positive	growth	28

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	99.616
125438	aerobe	91.729

Spore formation

@ref	Spore formation	Confidence
125438		92.423

Observation

67770

Observationquinones: MK-10(H₆), MK-9(H₆), MK-10(H₈)

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Host species	Country	Country ISO 3 Code	Continent	Geographic location
67770	Roots of Musa (ABB) cv. 'Kluai Namwa' from Chachoengsao Province	Musa	Thailand	THA	Asia
126114	roots of Musa species( ABB) cv. ‘Kluai Namwa’		Thailand	THA	Asia	Chachoengsao province

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM362663v1 assembly for Micromonospora musae MS1-9	contig	GCA_003626635	1894970.3	2867319477	1894970	68.22

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Micromonospora musae MS1-9 gene for 16S ribosomal RNA, partial sequence	LC177516	1400		1894970

GC content

@ref	GC-content (mol%)	Method
67770	72.2	genome sequence analysis

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: ASM362663v1 assembly for Micromonospora musae MS1-9
NCBI: GCA_003626635

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	99.62	no
125439	motility	BacteriaNetⓘ	no	83.85	no
125439	gram_stain	BacteriaNetⓘ	positive	97.88	no
125439	spore_formation	BacteriaNetⓘ	yes	40.61	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Micromonospora musae MS1-9
NCBI: GCA_003626635.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	89.37	no
125438	anaerobic	anaerobicⓘ	no	94.73	no
125438	aerobic	aerobicⓘ	yes	91.73	no
125438	spore-forming	spore-formingⓘ	yes	92.42	no
125438	thermophilic	thermophileⓘ	no	94.50	yes
125438	flagellated	motile2+ⓘ	no	90.50	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Micromonospora musae sp. nov., an endophytic actinomycete isolated from roots of Musa species.	Kuncharoen N, Kudo T, Yuki M, Okuma M, Booncharoen A, Tanasupawat S	Syst Appl Microbiol	10.1016/j.syapm.2019.126020	2019

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126114	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 118754
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Micromonospora musae (TISTR 2659, JCM 32149, DSM 118754)

Name and taxonomic classification

Morphology

Cell morphology

Multimedia

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Observation

Isolation, sampling and environmental information

Isolation

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_003626635

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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