Caproiciproducens galactitolivorans (KCCM 43048, JCM 30532)

Name: Caproiciproducens galactitolivorans (KCCM 43048, JCM 30532)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 163813

Type strain

Culture col. no. KCCM 43048 JCM 30532

NCBI tax ID(s) 642589

Special Collections JCM

Links

Caproiciproducens galactitolivorans JCM 30532 is a mesophilic prokaryote that was isolated from Wastewater treatment plant.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 393884

JCM 30532

@ref 20215

Last LPSN update 2025-12-16 10:09:18

Domain Bacillati

Phylum Bacillota

Class Clostridia

Order Eubacteriales

Family Oscillospiraceae

Genus Caproiciproducens

Species Caproiciproducens galactitolivorans

Full scientific name Caproiciproducens galactitolivorans Kim et al. 2015

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67770	positive	growth	37	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125438	anaerobe	93.161

Isolation, sampling and environmental information

Isolation

67770

Sample typeWastewater treatment plant

Taxonmaps

69479

Global distribution of 16S sequence FJ805840 (>99% sequence identity) for Caproiciproducens galactitolivorans subclade from Microbeatlas

Aquatic Samples	217
Soil Samples	86
Animal Samples	81
Plant Samples	29
Total Samples	413

Interaction and safety

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	NCBI tax ID	Score
67770	ASM476878v1 assembly for Caproiciproducens galactitolivorans BS-1	contig	GCA_004768785	642589.3	642589	70.44
67770	ASM880711v1 assembly for Caproiciproducens galactitolivorans BS-1	chromosome	GCA_008807115	642589.5	642589	58.15

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Caproiciproducens galactitolivorans strain BS-1 16S ribosomal RNA gene, partial sequence	FJ805840	1445		642589

GC content

@ref	GC-content (mol%)	Method
67770	50	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Caproiciproducens galactitolivorans strain BS-1
PATRIC: 642589.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	51.60	no
125439	motility	BacteriaNetⓘ	no	51.60	no
125439	gram_stain	BacteriaNetⓘ	variable	76.80	no
125439	oxygen_tolerance	BacteriaNetⓘ	anaerobe	83.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Caproiciproducens galactitolivorans strain BS-1
PATRIC: 642589.5

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	61.47	no
125438	anaerobic	anaerobicⓘ	yes	93.16	no
125438	aerobic	aerobicⓘ	no	98.67	no
125438	spore-forming	spore-formingⓘ	yes	54.59	no
125438	thermophilic	thermophileⓘ	no	78.66	yes
125438	flagellated	motile2+ⓘ	yes	66.10	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Genetics	Genome Sequence of the Caproic Acid-Producing Bacterium Caproiciproducens galactitolivorans BS-1(T) (JCM 30532).	Bengelsdorf FR, Poehlein A, Daniel R, Durre P	Microbiol Resour Announc	10.1128/MRA.00346-19	2019
Phylogeny	Caproiciproducens galactitolivorans gen. nov., sp. nov., a bacterium capable of producing caproic acid from galactitol, isolated from a wastewater treatment plant.	Kim BC, Seung Jeon B, Kim S, Kim H, Um Y, Sang BI	Int J Syst Evol Microbiol	10.1099/ijsem.0.000665	2015
Phylogeny	Caproicibacterium lactatifermentans sp. nov., isolated from pit clay used for the production of Chinese strong aroma-type liquor.	Wang H, Gu Y, Zhao D, Qiao Z, Zheng J, Gao J, Ren C, Xu Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.005206	2022
Phylogeny	Caproicibacterium amylolyticum gen. nov., sp. nov., a novel member of the family Oscillospiraceae isolated from pit clay used for making Chinese strong aroma-type liquor.	Gu Y, Zhu X, Lin F, Shen C, Li Y, Ao L, Fan W, Ren C, Xu Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.004789	2021

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Caproiciproducens galactitolivorans (KCCM 43048, JCM 30532)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

Genome sequences

Genome browser: GCA_004768785

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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