Name: Caproiciproducens galactitolivorans JCM 30532
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 163813

Type strain:

Species: Caproiciproducens galactitolivorans

Culture col. no.: JCM 30532, KCCM 43048

Strain history: B.-I. Sang; Hanyang Univ., South Korea; BS-1.

NCBI tax ID(s): 642589 (species)

Special Collections

Section

Caproiciproducens galactitolivorans JCM 30532 is an anaerobe bacterium that was isolated from Wastewater treatment plant.

anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Oscillospiraceae*
	Genus	*Caproiciproducens*
	Species	**Caproiciproducens galactitolivorans**
	Full Scientific Name (LPSN)	Caproiciproducens galactitolivorans Kim et al. 2015

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %93.161

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Wastewater treatment plant
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence FJ805840 (>99% sequence identity) for Caproiciproducens galactitolivorans subclade from Microbeatlas

Aquatic Samples	217
Soil Samples	86
Animal Samples	81
Plant Samples	29
Total Samples	413

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Caproiciproducens galactitolivorans strain BS-1 16S ribosomal RNA gene, partial sequence	FJ805840	1445	GenBank ENA	642589 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Caproiciproducens galactitolivorans BS-1	GCA_008807115	chromosome	GenBank ENA	642589 tax ID
[Ref.: #67770]	Caproiciproducens galactitolivorans BS-1	GCA_004768785	contig	GenBank ENA	642589 tax ID
[Ref.: #66792]	Caproiciproducens galactitolivorans strain BS-1	642589.5	complete	PATRIC	642589 tax ID	*
[Ref.: #66792]	Caproiciproducens galactitolivorans strain BS-1	642589.3	wgs	PATRIC	642589 tax ID	*

[Ref.: #67770]

GC-content

50 mol%

high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Caproiciproducens galactitolivorans strain BS-1 PATRIC: 642589.5
[Ref.: #69481]	spore-forming	spore-formingⓘ	no	71	no

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Caproiciproducens galactitolivorans strain BS-1 PATRIC: 642589.5
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	61.467	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	93.161	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	98.665	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	yes	54.59	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	78.664	yes
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	66.097	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 30532, KCCM 43048

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Caproiciproducens galactitolivorans gen. nov., sp. nov., a bacterium capable of producing caproic acid from galactitol, isolated from a wastewater treatment plant.	Kim BC, Seung Jeon B, Kim S, Kim H, Um Y, Sang BI	Int J Syst Evol Microbiol	10.1099/ijsem.0.000665	2015	*
Phylogeny	Caproicibacterium lactatifermentans sp. nov., isolated from pit clay used for the production of Chinese strong aroma-type liquor.	Wang H, Gu Y, Zhao D, Qiao Z, Zheng J, Gao J, Ren C, Xu Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.005206	2022	*
Phylogeny	Caproicibacterium amylolyticum gen. nov., sp. nov., a novel member of the family Oscillospiraceae isolated from pit clay used for making Chinese strong aroma-type liquor.	Gu Y, Zhu X, Lin F, Shen C, Li Y, Ao L, Fan W, Ren C, Xu Y	Int J Syst Evol Microbiol	10.1099/ijsem.0.004789	2021	*
Genetics	Genome Sequence of the Caproic Acid-Producing Bacterium Caproiciproducens galactitolivorans BS-1(T) (JCM 30532).	Bengelsdorf FR, Poehlein A, Daniel R, Durre P	Microbiol Resour Announc	10.1128/MRA.00346-19	2019	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

* These data were automatically processed and therefore are not curated

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Caproiciproducens galactitolivorans strain BS-1

Caproiciproducens galactitolivorans strain BS-1

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