Name: Alicyclobacillus sp. JCM 21416
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 163182

Type strain:

Species: Alicyclobacillus sp.

Culture col. no.: JCM 21416, IAM 14934

Strain history: IAM 14934 <-- K. Goto MIH 332.

NCBI tax ID(s): 337829 (species)

Special Collections

Other strains from Alicyclobacillus sp.

Section

When using BacDive for research please cite our paper

Alicyclobacillus sp. JCM 21416 is a thermophilic bacterium that was isolated from Soil near a geyser.

thermophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	09-12-2024 (DD-MM-YYYY)
	Domain	*Bacteria*
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Alicyclobacillaceae*
	Genus	*Alicyclobacillus*
	Full Scientific Name (LPSN)	Alicyclobacillus Wisotzkey et al. 1992

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	60 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil near a geyser
[Ref.: #67770]	Geographic location (country and/or sea, region)	Kirishima area, Kagoshima Pref.
[Ref.: #67770]	Country	Japan
[Ref.: #67770]	Country ISO 3 Code	JPN
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AB060165 (>99% sequence identity) for Alicyclobacillus sendaiensis from Microbeatlas

Aquatic Samples	23
Soil Samples	30
Animal Samples	37
Plant Samples	15
Total Samples	105

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Alicyclobacillus sp. MIH 332 gene for 16S rRNA	AB060165	1520	GenBank ENA	157833 tax ID
[Ref.: #124043]	Alicyclobacillus sp. IAM 14934 gene for 16S rRNA, partial sequence.	AB222249	1520	GenBank ENA	337829 tax ID	*

[Ref.: #67770]

GC-content

62.5 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 21416, IAM 14934

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#124043

Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .

* These data were automatically processed and therefore are not curated

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