Name: Parapontixanthobacter aurantiacus JCM 19853
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162633

Type strain:

Species: Parapontixanthobacter aurantiacus

Culture col. no.: JCM 19853, CGMCC 1.12762, LMG 28110, MCCC 1A09962

Strain history: G. Zhang O30.

NCBI tax ID(s): 1463599 (species)

Section

Parapontixanthobacter aurantiacus JCM 19853 is a mesophilic bacterium that was isolated from Deep-sea sediment of the west Pacific.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Sphingomonadales*
	Family	*Erythrobacteraceae*
	Genus	*Parapontixanthobacter*
	Species	**Parapontixanthobacter aurantiacus**
	Full Scientific Name (LPSN)	Parapontixanthobacter aurantiacus (Zhang et al. 2016) Xu et al. 2020

Synonym

Altererythrobacter aurantiacus

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: Q-10, Q-9, Q-8

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Deep-sea sediment of the west Pacific
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Altererythrobacter aurantiacus strain O30 16S ribosomal RNA gene, partial sequence	KF924607	1451	ENA	1463599 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Parapontixanthobacter aurantiacus MCCC 1A09962	GCA_009827635	contig	GenBank	1463599 tax ID

[Ref.: #67770]	GC-content	61.2 mol%	genome sequence analysis
[Ref.: #67770]	GC-content	56.9 mol%	high performance liquid chromatography (HPLC)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Parapontixanthobacter aurantiacus MCCC 1A09962 NCBI: GCA_009827635.1
[Ref.: #69480]	motile	no	87.816	no
[Ref.: #69480]	flagellated	no	97.098	no
[Ref.: #69480]	gram-positive	no	96.721	no
[Ref.: #69480]	anaerobic	no	99.436	no
[Ref.: #69480]	aerobic	yes	95.645	no
[Ref.: #69480]	halophile	no	87.41	no
[Ref.: #69480]	spore-forming	no	95.923	no
[Ref.: #69480]	glucose-util	yes	90.337	no
[Ref.: #69480]	thermophile	no	95.543	no
[Ref.: #69480]	glucose-ferment	no	92.824	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19853, CGMCC 1.12762, LMG 28110, MCCC 1A09962

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Actirhodobacter atriluteus gen. nov., sp. nov., isolated from the surface water of the Yellow Sea.	Xue HP, Zhang DF, Xu L, Wang XN, Zhang AH, Huang JK, Liu C	Antonie Van Leeuwenhoek	10.1007/s10482-021-01576-w	2021	*
Phylogeny	Altererythrobacter aurantiacus sp. nov., isolated from deep-sea sediment.	Zhang G, Yang Y, Wang L	Antonie Van Leeuwenhoek	10.1007/s10482-016-0726-1	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Parapontixanthobacter aurantiacus MCCC 1A09962

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