Name: Porphyromonas pogonae JCM 19732
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162592

Type strain:

Species: Porphyromonas pogonae

Culture col. no.: JCM 19732, ATCC BAA-2643

Strain history: Y. Kawamura PAGU1787 <-- D. A. Bemis MI 10-1288.

NCBI tax ID(s): 867595 (species)

Other strains from Porphyromonas pogonae

P. pogonae 571607, 101539, DSM 101539

Section

Porphyromonas pogonae JCM 19732 is a mesophilic bacterium that was isolated from Dorsal skin abscess of central bearded dragon .

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Bacteroidia*
	Order	*Bacteroidales*
	Family	*Porphyromonadaceae*
	Genus	*Porphyromonas*
	Species	**Porphyromonas pogonae**
	Full Scientific Name (LPSN)	Porphyromonas pogonae Kawamura et al. 2015

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	37 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-9

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Dorsal skin abscess of central bearded dragon (Pogona vitticeps)
[Ref.: #67770]	Host species	Pogona vitticeps
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence HM583587 (>99% sequence identity) for Porphyromonas pogonae subclade from Microbeatlas

Aquatic Samples	156
Soil Samples	63
Animal Samples	2753
Plant Samples	22
Total Samples	2994

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Porphyromonas pogonae strain MI 10-1288 16S ribosomal RNA gene, partial sequence	HM583587	1429	ENA	867595 tax ID

[Ref.: #67770]

GC-content

43 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19732, ATCC BAA-2643

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Porphyromonas pogonae sp. nov., an anaerobic but low concentration oxygen adapted coccobacillus isolated from lizards (Pogona vitticeps) or human clinical specimens, and emended description of the genus Porphyromonas Shah and Collins 1988.	Kawamura Y, Kuwabara S, Kania SA, Kato H, Hamagishi M, Fujiwara N, Sato T, Tomida J, Tanaka K, Bemis DA	Syst Appl Microbiol	10.1016/j.syapm.2014.11.004	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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