Name: Paenibacillus cucumis JCM 19515
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162540

Type strain:

Species: Paenibacillus cucumis

Culture col. no.: JCM 19515, KACC 17444

Strain history: J. K. Song and S.-W. Kwon CO 4-7.

Other strains from Paenibacillus cucumis

P. cucumis AP-115, DSM 101601, CCM 8653, LMG ... (type strain)
P. cucumis AP-115, CIP 110979 (type strain)

Section

Paenibacillus cucumis JCM 19515 is a mesophilic bacterium that was isolated from Greenhouse soil cultivated with cucumber.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Paenibacillus*
	Species	"Paenibacillus cucumis"
	Full Scientific Name (LPSN)	Paenibacillus cucumis Ahn et al. 2014

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Greenhouse soil cultivated with cucumber
[Ref.: #67770]	Geographic location (country and/or sea, region)	Cheongsong
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence KF289905 (>99% sequence identity) for 'Paenibacillus cucumis' subclade from Microbeatlas

Aquatic Samples	108
Soil Samples	1707
Animal Samples	70
Plant Samples	335
Total Samples	2220

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Paenibacillus cucumis strain CO 4-7 16S ribosomal RNA gene, partial sequence	KF289905	1471	ENA	1367381 tax ID

[Ref.: #67770]

GC-content

48.5 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 19515, KACC 17444

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus cucumis sp. nov. isolated from greenhouse soil.	Ahn JH, Kim BC, Kim BY, Kim SJ, Song J, Kwon SW, Weon HY	J Microbiol	10.1007/s12275-014-4071-7	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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