Aestuariibaculum scopimerae (KCTC 32459, JCM 19486)

Name: Aestuariibaculum scopimerae (KCTC 32459, JCM 19486)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 162527

Type strain

Culture col. no. KCTC 32459 JCM 19486

NCBI tax ID(s) 1367864

Special Collections JCM KCTC

History K. S. Bae I-15.

Links

Aestuariibaculum scopimerae JCM 19486 is a bacterium that was isolated from Gut of a globular ghost crab collected at a seashore region of the Yellow Sea.

16S sequence Bacteria

Name and taxonomic classification

SI-ID 26862

KCTC 32459,JCM 19486

@ref 20215

Last LPSN update 2026-02-09 11:39:25

Domain Bacteria

Phylum Bacteroidota

Class Flavobacteriia

Order Flavobacteriales

Family Flavobacteriaceae

Genus Aestuariibaculum

Species Aestuariibaculum scopimerae

Full scientific name Aestuariibaculum scopimerae Lee et al. 2021

Morphology

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	25

Physiology and metabolism

Observation

67770

Observationquinones: MK-6

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Country	Country ISO 3 Code	Continent
67770	Gut of a globular ghost crab collected at a seashore region of the Yellow Sea	Republic of Korea	KOR	Asia

Taxonmaps

69479

Global distribution of 16S sequence KF303137 (>99% sequence identity) for Aestuariibaculum scopimerae subclade from Microbeatlas

Aquatic Samples	51
Soil Samples	2
Animal Samples
Plant Samples
Total Samples	53

Interaction and safety

Sequence information

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67770	Aestuariibaculum scopimerae strain I-15 16S ribosomal RNA gene, partial sequence	KF303137	1450		1367864

GC content

@ref	GC-content (mol%)	Method
67770	39	high performance liquid chromatography (HPLC)

Genome-based predictions

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Aestuariibaculum scopimerae sp. nov., isolated from the globular ghost crab, Scopimera globosa.	Lee JB, Kim BC, Kim H, Bae KS, Yang JH, Chun YY, Park SJ, Park DS	J Microbiol	10.1007/s12275-013-3499-5	2013

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Aestuariibaculum scopimerae (KCTC 32459, JCM 19486)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture temp

Physiology and metabolism

Observation

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Sequence information

16S sequences

GC content

Genome-based predictions

Literature

Literature

References

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