Name: Marinobacter nitratireducens JCM 18428
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162244

Type strain:

Species: Marinobacter nitratireducens

Culture col. no.: JCM 18428, MTCC 11704

Strain history: P. Anil Kumar AK21.

NCBI tax ID(s): 1137280 (species)

Section

Marinobacter nitratireducens JCM 18428 is a mesophilic bacterium that was isolated from Coastal surface sea water from the shore at Rushikonda beach on the Bay of Bengal in Visakhapatnam.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Alteromonadales*
	Family	*Alteromonadaceae*
	Genus	*Marinobacter*
	Species	**Marinobacter nitratireducens**
	Full Scientific Name (LPSN)	Marinobacter nitratireducens Vaidya et al. 2015

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Coastal surface sea water from the shore at Rushikonda beach on the Bay of Bengal in Visakhapatnam
[Ref.: #67770]	Country	India
[Ref.: #67770]	Country ISO 3 Code	IND
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence HE653973 (>99% sequence identity) for Marinobacter nitratireducens subclade from Microbeatlas

Aquatic Samples	626
Soil Samples	88
Animal Samples	26
Plant Samples	4
Total Samples	744

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Marinobacter nitratireducens partial 16S rRNA gene, type strain AK21T	HE653973	1479	ENA	1137280 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Marinobacter nitratireducens AK21	GCA_000708045	contig	GenBank	1137280 tax ID

[Ref.: #67770]

GC-content

54.6 mol%

thermal denaturation, midpoint method (Tm)

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Marinobacter nitratireducens AK21 NCBI: GCA_000708045.1
[Ref.: #69480]	motile	yes	92.41	no
[Ref.: #69480]	flagellated	yes	94.434	no
[Ref.: #69480]	gram-positive	no	98.741	no
[Ref.: #69480]	anaerobic	no	97.636	no
[Ref.: #69480]	halophile	yes	91.016	no
[Ref.: #69480]	spore-forming	no	94.45	no
[Ref.: #69480]	thermophile	no	98.521	yes
[Ref.: #69480]	glucose-util	no	51.469	no
[Ref.: #69480]	aerobic	yes	82.83	no
[Ref.: #69480]	glucose-ferment	no	87.528	no

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 18428, MTCC 11704

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Marinobacter nitratireducens sp. nov., a halophilic and lipolytic bacterium isolated from coastal surface sea water.	Vaidya B, Kumar R, Korpole S, Tanuku NRS, Pinnaka AK	Int J Syst Evol Microbiol	10.1099/ijs.0.000218	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

* These data were automatically processed and therefore are not curated

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Marinobacter nitratireducens AK21

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