Name: Pedobacter jeongneungensis JCM 17626
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 162061

Type strain:

Species: Pedobacter jeongneungensis

Culture col. no.: JCM 17626, KACC 15514

Strain history: W. Park BH45.

NCBI tax ID(s): 947309 (species)

Section

Pedobacter jeongneungensis JCM 17626 is a mesophilic bacterium that was isolated from Forest soils of Mt. Bukhan in jeongneung.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacteroidota*
	Class	*Sphingobacteriia*
	Order	*Sphingobacteriales*
	Family	*Sphingobacteriaceae*
	Genus	*Pedobacter*
	Species	"Pedobacter jeongneungensis"
	Full Scientific Name (LPSN)	Pedobacter jeongneungensis Jung and Park 2012

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	25 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-7

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Forest soils of Mt. Bukhan in jeongneung
[Ref.: #67770]	Geographic location (country and/or sea, region)	Seoul
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence HQ621857 (>99% sequence identity) for Pedobacter jeongneungensis subclade from Microbeatlas

Aquatic Samples	33
Soil Samples	96
Animal Samples	104
Plant Samples	35
Total Samples	268

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Pedobacter jeongneungensis strain BH45 16S ribosomal RNA gene, partial sequence	HQ621857	1445	ENA	947309 tax ID

[Ref.: #67770]

GC-content

40.2 mol%

thermal denaturation, midpoint method (Tm)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 17626, KACC 15514

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Pedobacter jeongneungensis sp. nov., isolated from forest soil.	Jung J, Park W	J Microbiol	10.1007/s12275-012-1629-0	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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