Name: Tabrizicola aquatica RCRI19
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 161997

Type strain:

Species: Tabrizicola aquatica

Strain Designation: RCRI19

Culture col. no.: JCM 17277, KCTC 23724, LMG 25773, UCCCB39, BCCM/LMG 25773

Strain history: Tarhriz V et al. (2019) Emended description of the genus Tabrizicolaand the species Tabrizicola aquaticaas aerobic anoxygenicphototrophic bacteria https://doi.org/10.1007/s10482-019-01249-9

NCBI tax ID(s): 909926 (species)

Section

Tabrizicola aquatica RCRI19 is a mesophilic bacterium that was isolated from Water from Qurugöl Lake located in Azerbaijan.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Paracoccaceae*
	Genus	*Tabrizicola*
	Species	**Tabrizicola aquatica**
	Full Scientific Name (LPSN)	Tabrizicola aquatica Tarhriz et al. 2014

Information on culture and growth conditions Culture and growth conditions

		Temperature
[Ref.: #67770]	growth	30 °C
[Ref.: #67772]	optimum	40-45 °C
[Ref.: #67772]	minimum	15 °C
[Ref.: #67772]	maximum	55 °C

[Ref.: #67770]	Temperature range	mesophilic
[Ref.: #67772]	Temperature range	thermophilic
[Ref.: #67772]	Temperature range	psychrophilic
[Ref.: #67772]	Temperature range	thermophilic

		pH
[Ref.: #67772]	maximum	9.0
[Ref.: #67772]	minimum	6.0
[Ref.: #67772]	optimum	7.0

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Water from Qurugöl Lake located in Azerbaijan
[Ref.: #67770]	Country	Iran
[Ref.: #67770]	Country ISO 3 Code	IRN
[Ref.: #67770]	Continent	Asia

[Ref.: #67772]	Sample type/isolated from	Water from Qurugöl Lake
[Ref.: #67772]	Sampling date	2007
[Ref.: #67772]	Geographic location (country and/or sea, region)	East Azerbaijan, Tabriz
[Ref.: #67772]	Country	Iran
[Ref.: #67772]	Country ISO 3 Code	IRN
[Ref.: #67772]	Continent	Asia
[Ref.: #67772]	Geographic location	37.9163°/46.7012°
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence HQ392507 (>99% sequence identity) for Tabrizicola aquatica subclade from Microbeatlas

Aquatic Samples	967
Soil Samples	147
Animal Samples	51
Plant Samples	39
Total Samples	1204

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #67772]

Biosafety level

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67772]	Tabrizicola aquatica strain RCRI19 16S ribosomal RNA gene, partial sequence	HQ392507	1388	ENA	909926 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67772]	Tabrizicola aquatica RCRI19	GCA_002900975	contig	GenBank	909926 tax ID
[Ref.: #66792]	Tabrizicola aquatica RCRI19	2831671779	draft	JGI IMG/M	909926 tax ID	*

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 17277, KCTC 23724, LMG 25773, UCCCB39, BCCM/LMG 25773

Literature:

Only first 10 entries are displayed. Click here to see all.

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Szabonella alba gen. nov., sp. nov., a motile alkaliphilic bacterium of the family Rhodobacteraceae isolated from a soda lake.	Szuroczki S, Abbaszade G, Boka K, Schumann P, Neumann-Schaal M, Toth E	Int J Syst Evol Microbiol	10.1099/ijsem.0.005219	2022	*
Phylogeny	Neotabrizicola shimadae gen. nov., sp. nov., an aerobic anoxygenic phototrophic bacterium harbouring photosynthetic genes in the family Rhodobacteraceae, isolated from a terrestrial hot spring.	Muramatsu S, Hirose S, Iino T, Ohkuma M, Hanada S, Haruta S	Antonie Van Leeuwenhoek	10.1007/s10482-022-01728-6	2022	*
Phylogeny	Tabrizicola piscis sp. nov., isolated from the intestinal tract of a Korean indigenous freshwater fish, Acheilognathus koreensis.	Han JE, Kang W, Lee JY, Sung H, Hyun DW, Kim HS, Kim PS, Tak EJ, Jeong YS, Lee JY, Lee SY, Yun JH, Jung MJ, Shin NR, Whon TW, Kang MS, Lee KE, Lee BH, Bae JW	Int J Syst Evol Microbiol	10.1099/ijsem.0.004034	2020	*
Phylogeny	Tabrizicola alkalilacus sp. nov., isolated from alkaline Lake Dajiaco on the Tibetan Plateau.	Phurbu D, Wang H, Tang Q, Lu H, Zhu H, Jiang S, Xing P, Wu QL	Int J Syst Evol Microbiol	10.1099/ijsem.0.003635	2019	*
Phylogeny	Tabrizicola sediminis sp. nov., one aerobic anoxygenic photoheterotrophic bacteria from sediment of saline lake.	Liu ZX, Dorji P, Liu HC, Li AH, Zhou YG	Int J Syst Evol Microbiol	10.1099/ijsem.0.003542	2019	*
Phylogeny	Emended description of the genus Tabrizicola and the species Tabrizicola aquatica as aerobic anoxygenic phototrophic bacteria.	Tarhriz V, Hirose S, Fukushima SI, Hejazi MA, Imhoff JF, Thiel V, Hejazi MS	Antonie Van Leeuwenhoek	10.1007/s10482-019-01249-9	2019	*
Phylogeny	Tabrizicola fusiformis sp. nov., isolated from an industrial wastewater treatment plant.	Ko DJ, Kim JS, Park DS, Lee DH, Heo SY, Seo JW, Kim CH, Oh BR	Int J Syst Evol Microbiol	10.1099/ijsem.0.002760	2018	*
Phylogeny	Tabrizicola aquatica gen. nov. sp. nov., a novel alphaproteobacterium isolated from Qurugol Lake nearby Tabriz city, Iran.	Tarhriz V, Thiel V, Nematzadeh G, Hejazi MA, Imhoff JF, Hejazi MS	Antonie Van Leeuwenhoek	10.1007/s10482-013-0042-y	2013	*
Phylogeny	Tabrizicola rongguiensis sp. nov., isolated from the sediment of a river in Ronggui, Foshan city, China.	Xu J, Deng T, Huang Y, Dong M, Yang S, Xu M	Int J Syst Evol Microbiol	10.1099/ijsem.0.005539	2022	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67772 The University of Coimbra Bacteria Culture Collection (UCCCB) ; Curators of the UCCCB;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

Change proposal

You found an error in BacDive? Please tell us about it!

Note that changes will be reviewed and judged. If your changes are legitimate, changes will occur within the next BacDive update. Only proposed changes supported by the according reference will be reviewed. The BacDive team reserves the right to reject proposed changes.

Search for species Tabrizicola aquatica in external resources:
SILVA
BRENDA
PANGAEA
StrainInfo
GBIF