Tabrizicola aquatica (LMG 25773, KCTC 23724, JCM 17277)

Name: Tabrizicola aquatica (LMG 25773, KCTC 23724, JCM 17277)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 161997

Type strain

Strain Designation RCRI19

Culture col. no. LMG 25773 KCTC 23724 JCM 17277 UCCCB39 BCCM/LMG 25773 1 more

NCBI tax ID(s) 909926

Special Collections JCM KCTC UCCCB

History V. Tarhriz RCRI19. Tarhriz V et al. (2019) Emended description of the genus Tabrizicolaand the species Tabrizicola aquaticaas aerobic anoxygenicphototrophic bacteria https://doi.org/10.1007/s10482-019-01249-9

Links

Tabrizicola aquatica RCRI19 is a bacterium that was isolated from Water from Qurugöl Lake located in Azerbaijan.

genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 266478

LMG 25773,KCTC 23724,JCM 17277

@ref 20215

Last LPSN update 2026-02-09 11:39:18

Domain Bacteria

Phylum Pseudomonadota

Class Alphaproteobacteria

Order Rhodobacterales

Family Paracoccaceae

Genus Tabrizicola

Species Tabrizicola aquatica

Full scientific name Tabrizicola aquatica Tarhriz et al. 2014

Morphology

Cell morphology

@ref	Gram stain	Confidence
125439	negative	92.3

Culture and growth conditions

Culture temp

@ref	Growth	Type	Temperature (°C)
67770	positive	growth	30
67772	positive	optimum	40-45
67772	positive	minimum	15
67772	positive	maximum	55

Culture pH

@ref	Ability	Type	PH	PH range
67772	positive	maximum	9.0	alkaliphile
67772	positive	minimum	6.0
67772	positive	optimum	7.0

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	obligate aerobe	90.1

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Sampling date	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
67770	Water from Qurugöl Lake located in Azerbaijan			Iran	IRN	Asia
67772	Water from Qurugöl Lake	2007	East Azerbaijan, Tabriz	Iran	IRN	Asia	37.9163	46.7012 37.9163/46.7012

Taxonmaps

69479

Global distribution of 16S sequence HQ392507 (>99% sequence identity) for Tabrizicola aquatica subclade from Microbeatlas

Aquatic Samples	967
Soil Samples	147
Animal Samples	51
Plant Samples	39
Total Samples	1204

Interaction and safety

Risk assessment

67772

Biosafety level1

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67772	ASM290097v1 assembly for Tabrizicola aquatica RCRI19	contig	GCA_002900975	909926.3	2831671779	909926	77.4

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67772	Tabrizicola aquatica strain RCRI19 16S ribosomal RNA gene, partial sequence	HQ392507	1388		909926

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Tabrizicola aquatica RCRI19
NCBI: GCA_002900975

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	no	69.60	no
125439	motility	BacteriaNetⓘ	no	53.40	no
125439	gram_stain	BacteriaNetⓘ	negative	92.30	no
125439	oxygen_tolerance	BacteriaNetⓘ	obligate aerobe	90.10	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Emended description of the genus Tabrizicola and the species Tabrizicola aquatica as aerobic anoxygenic phototrophic bacteria.	Tarhriz V, Hirose S, Fukushima SI, Hejazi MA, Imhoff JF, Thiel V, Hejazi MS	Antonie Van Leeuwenhoek	10.1007/s10482-019-01249-9	2019
Phylogeny	Szabonella alba gen. nov., sp. nov., a motile alkaliphilic bacterium of the family Rhodobacteraceae isolated from a soda lake.	Szuroczki S, Abbaszade G, Boka K, Schumann P, Neumann-Schaal M, Toth E	Int J Syst Evol Microbiol	10.1099/ijsem.0.005219	2022
Phylogeny	Neotabrizicola shimadae gen. nov., sp. nov., an aerobic anoxygenic phototrophic bacterium harbouring photosynthetic genes in the family Rhodobacteraceae, isolated from a terrestrial hot spring.	Muramatsu S, Hirose S, Iino T, Ohkuma M, Hanada S, Haruta S	Antonie Van Leeuwenhoek	10.1007/s10482-022-01728-6	2022
Phylogeny	Tabrizicola piscis sp. nov., isolated from the intestinal tract of a Korean indigenous freshwater fish, Acheilognathus koreensis.	Han JE, Kang W, Lee JY, Sung H, Hyun DW, Kim HS, Kim PS, Tak EJ, Jeong YS, Lee JY, Lee SY, Yun JH, Jung MJ, Shin NR, Whon TW, Kang MS, Lee KE, Lee BH, Bae JW	Int J Syst Evol Microbiol	10.1099/ijsem.0.004034	2020
Phylogeny	Tabrizicola alkalilacus sp. nov., isolated from alkaline Lake Dajiaco on the Tibetan Plateau.	Phurbu D, Wang H, Tang Q, Lu H, Zhu H, Jiang S, Xing P, Wu QL	Int J Syst Evol Microbiol	10.1099/ijsem.0.003635	2019
Phylogeny	Tabrizicola sediminis sp. nov., one aerobic anoxygenic photoheterotrophic bacteria from sediment of saline lake.	Liu ZX, Dorji P, Liu HC, Li AH, Zhou YG	Int J Syst Evol Microbiol	10.1099/ijsem.0.003542	2019
Phylogeny	Tabrizicola fusiformis sp. nov., isolated from an industrial wastewater treatment plant.	Ko DJ, Kim JS, Park DS, Lee DH, Heo SY, Seo JW, Kim CH, Oh BR	Int J Syst Evol Microbiol	10.1099/ijsem.0.002760	2018
Phylogeny	Tabrizicola aquatica gen. nov. sp. nov., a novel alphaproteobacterium isolated from Qurugol Lake nearby Tabriz city, Iran.	Tarhriz V, Thiel V, Nematzadeh G, Hejazi MA, Imhoff JF, Hejazi MS	Antonie Van Leeuwenhoek	10.1007/s10482-013-0042-y	2013
Phylogeny	Tabrizicola rongguiensis sp. nov., isolated from the sediment of a river in Ronggui, Foshan city, China.	Xu J, Deng T, Huang Y, Dong M, Yang S, Xu M	Int J Syst Evol Microbiol	10.1099/ijsem.0.005539	2022

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#67772	The University of Coimbra Bacteria Culture Collection (UCCCB) ; Curators of the UCCCB;
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Tabrizicola aquatica (LMG 25773, KCTC 23724, JCM 17277)

Name and taxonomic classification

Morphology

Cell morphology

Culture and growth conditions

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_002900975

16S sequences

Genome-based predictions

Predictions

Literature

Literature

References

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