Name: Fimbriimonas ginsengisoli JCM 17079
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 161921

Type strain:

Species: Fimbriimonas ginsengisoli

Culture col. no.: JCM 17079, KACC 14959

Strain history: W.-T. Im Gsoil 348.

NCBI tax ID(s): 1005039 (species)

Section

Fimbriimonas ginsengisoli JCM 17079 is a mesophilic bacterium that was isolated from Soil of a ginseng field in Pocheon Province.

mesophilic
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Armatimonadota*
	Class	*Fimbriimonadia*
	Order	*Fimbriimonadales*
	Family	*Fimbriimonadaceae*
	Genus	*Fimbriimonas*
	Species	**Fimbriimonas ginsengisoli**
	Full Scientific Name (LPSN)	Fimbriimonas ginsengisoli Im et al. 2012

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #67770]

Observation

quinones: MK-11, MK-10

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Soil of a ginseng field in Pocheon Province
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence GQ339893 (>99% sequence identity) for Fimbriimonas ginsengisoli subclade from Microbeatlas

Aquatic Samples	585
Soil Samples	1164
Animal Samples	53
Plant Samples	148
Total Samples	1950

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Fimbriimonas ginsengisoli Gsoil 348 16S ribosomal RNA gene, partial sequence	GQ339893	1443	ENA	661478 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Fimbriimonas ginsengisoli Gsoil 348 GSoil 348	GCA_000724625	complete	GenBank	661478 tax ID

[Ref.: #67770]

GC-content

61.4 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 17079, KACC 14959

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Description of Fimbriimonas ginsengisoli gen. nov., sp. nov. within the Fimbriimonadia class nov., of the phylum Armatimonadetes.	Im WT, Hu ZY, Kim KH, Rhee SK, Meng H, Lee ST, Quan ZX	Antonie Van Leeuwenhoek	10.1007/s10482-012-9739-6	2012	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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Search for species Fimbriimonas ginsengisoli in external resources:
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