Name: Paracoccus caeni JCM 16385
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 161768

Type strain:

Species: Paracoccus caeni

Culture col. no.: JCM 16385, BCRC 81036, KCTC 22480, KEMB 9004-001

Strain history: M. J. Lee MJ17.

NCBI tax ID(s): 657651 (species)

Section

Paracoccus caeni JCM 16385 is a mesophilic bacterium that was isolated from Sludge at the Daejeon sewage disposal plant.

mesophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Alphaproteobacteria*
	Order	*Rhodobacterales*
	Family	*Paracoccaceae*
	Genus	*Paracoccus*
	Species	**Paracoccus caeni**
	Full Scientific Name (LPSN)	Paracoccus caeni Lee et al. 2011

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	30 °C

[Ref.: #67770]

Temperature range

mesophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Sludge at the Daejeon sewage disposal plant
[Ref.: #67770]	Country	Republic of Korea
[Ref.: #67770]	Country ISO 3 Code	KOR
[Ref.: #67770]	Continent	Asia
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence GQ250442 (>99% sequence identity) for Paracoccus caeni from Microbeatlas

Aquatic Samples	51
Soil Samples	15
Animal Samples	73
Plant Samples	12
Total Samples	151

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Paracoccus caeni strain MJ17 16S ribosomal RNA gene, partial sequence	GQ250442	1403	ENA	657651 tax ID

[Ref.: #67770]

GC-content

58.7 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 16385, BCRC 81036, KCTC 22480, KEMB 9004-001

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paracoccus caeni sp. nov., isolated from sludge.	Lee M, Woo SG, Park G, Kim MK	Int J Syst Evol Microbiol	10.1099/ijs.0.017897-0	2010	*
Phylogeny	Paracoccus panacisoli sp. nov., isolated from a forest soil cultivated with Vietnamese ginseng.	Nguyen NL, Kim YJ, Hoang VA, Tran BT, Pham HS, Yang DC	Int J Syst Evol Microbiol	10.1099/ijs.0.000125	2015	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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