Name: Thiocystis chemoclinalis JCM 15112
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 161573

Type strain:

Species: Thiocystis chemoclinalis

Culture col. no.: JCM 15112, KCTC 5954

Strain history: S. Peduzzi CadH11.

NCBI tax ID(s): 346389 (species)

Section

Thiocystis chemoclinalis JCM 15112 is a psychrophilic bacterium that was isolated from Chemocline of Lake Cadagno, a crenogenic meromictic lake.

psychrophilic
16S sequence
Bacteria

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Pseudomonadota*
	Class	*Gammaproteobacteria*
	Order	*Chromatiales*
	Family	*Chromatiaceae*
	Genus	*Thiocystis*
	Species	**Thiocystis chemoclinalis**
	Full Scientific Name (LPSN)	Thiocystis chemoclinalis Peduzzi et al. 2011

Information on culture and growth conditions Culture and growth conditions

	Temperatures	Kind of temperature		Temperature
[Ref.: #67770]			growth	20 °C

[Ref.: #67770]

Temperature range

psychrophilic

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67770]	Sample type/isolated from	Chemocline of Lake Cadagno, a crenogenic meromictic lake
[Ref.: #67770]	Country	Switzerland
[Ref.: #67770]	Country ISO 3 Code	CHE
[Ref.: #67770]	Continent	Europe
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence AM086641 (>99% sequence identity) for Thiocystis chemoclinalis from Microbeatlas

Aquatic Samples	37
Soil Samples	1
Animal Samples	2
Plant Samples	1
Total Samples	41

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67770]	Thiocystis chemoclinalis H1.1 partial 16S rRNA gene, type strain CadH11T	AM086641	1391	ENA	346389 tax ID

[Ref.: #67770]

GC-content

68.1 mol%

high performance liquid chromatography (HPLC)

Availability in culture collections External links

[Ref.: #67770]

Culture collection no.

JCM 15112, KCTC 5954

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Thiocystis chemoclinalis sp. nov. and Thiocystis cadagnonensis sp. nov., motile purple sulfur bacteria isolated from the chemocline of a meromictic lake.	Peduzzi S, Welsh A, Demarta A, Decristophoris P, Peduzzi R, Hahn D, Tonolla M	Int J Syst Evol Microbiol	10.1099/ijs.0.010397-0	2010	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#67770 Japan Collection of Microorganism (JCM) ; Curators of the JCM;

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

* These data were automatically processed and therefore are not curated

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