Cytobacillus solani (DSM 29501, CCTCC AB 2014277, FJAT-18043)

Name: Cytobacillus solani (DSM 29501, CCTCC AB 2014277, FJAT-18043)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 160732

Type strain

Strain Designation FJAT-18043

Culture col. no. DSM 29501 CCTCC AB 2014277 FJAT-18043

NCBI tax ID(s) 1637975

Special Collections DSMZ

Links

Cytobacillus solani FJAT-18043 is a mesophilic prokaryote that was isolated from rhizosphere soil from a potato field.

mesophilic genome sequence 16S sequence

Name and taxonomic classification

SI-ID 397375

DSM 29501

@ref 20215

Last LPSN update 2025-12-16 10:08:34

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Cytobacillaceae

Genus Cytobacillus

Species Cytobacillus solani

Full scientific name Cytobacillus solani (Liu et al. 2015) Patel and Gupta 2020

Synonyms (3)

Bacillus ciccensis
Cytobacillus ciccensis
Bacillus solani

Morphology

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
67645	NUTRIENT AGAR (DSMZ Medium 1)		Medium recipe at MediaDive	Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
67645	positive	growth	30	mesophilic

Physiology and metabolism

Oxygen tolerance

@ref	Oxygen tolerance	Confidence
125439	facultative anaerobe	91.1

Spore formation

@ref	Spore formation	Confidence
125439		93
125438		92.541

Isolation, sampling and environmental information

Isolation

@ref	Sample type	Geographic location	Country	Country ISO 3 Code	Continent	Latitude	Longitude
67645	rhizosphere soil from a potato field	Xinjiang province, Yili district, Nilka county (43° 46' 28'' N 82° 35' 1'' E)	China	CHN	Asia	43.7744	82.5836 43.7744/82.5836

Taxonmaps

69479

Global distribution of 16S sequence KP268082 (>99% sequence identity) for Bacillaceae from Microbeatlas

Aquatic Samples	80
Soil Samples	273
Animal Samples	120
Plant Samples	68
Total Samples	541

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
67645	1	Risk group (German classification)

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	IMG accession	NCBI tax ID	Score
66792	ASM142059v1 assembly for Cytobacillus solani FJAT-18043	scaffold	GCA_001420595	2648501128	1637975	74.57

Genome browser: GCA_001420595

16S sequences

@ref	Description	Accession	Length	Database	NCBI tax ID
67645	Cytobacillus solani strain FJAT-18043 16S ribosomal RNA gene, partial sequence	KP268082	1410		1637975

GC content

@ref	GC-content (mol%)	Method
67645	48.8	high performance liquid chromatography (HPLC)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Cytobacillus solani FJAT-18043
NCBI: GCA_001420595

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	93.00	no
125439	motility	BacteriaNetⓘ	yes	87.30	no
125439	gram_stain	BacteriaNetⓘ	variable	80.70	no
125439	oxygen_tolerance	BacteriaNetⓘ	facultative anaerobe	91.10	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Cytobacillus solani FJAT-18043
NCBI: GCA_001420595.1

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	68.69	no
125438	anaerobic	anaerobicⓘ	no	95.32	no
125438	aerobic	aerobicⓘ	yes	68.54	no
125438	spore-forming	spore-formingⓘ	yes	92.54	no
125438	thermophilic	thermophileⓘ	no	93.68	yes
125438	flagellated	motile2+ⓘ	yes	79.55	no

Literature

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Bacillus dafuensis sp. Nov., Isolated from a Forest Soil in China.	Zheng X, Liu G, Wang Z, Wang J, Zhang H, Liu B	Curr Microbiol	10.1007/s00284-020-02014-2	2020
Phylogeny	Bacillus solani sp. nov., isolated from rhizosphere soil of a potato field.	Liu B, Liu GH, Sengonca C, Schumann P, Ge CB, Wang JP, Cui WD, Lin NQ	Int J Syst Evol Microbiol	10.1099/ijsem.0.000539	2015
Phylogeny	Bacillus telluris sp. nov. Isolated from Greenhouse Soil in Beijing, China.	Guo HB, He SW, Wang X, Thin KK, Wei HL, Zhang XX	Microorganisms	10.3390/microorganisms8050702	2020
Phylogeny	Bacillus ciccensis sp. nov., isolated from maize (Zea mays L.) seeds.	Liu Y, Li N, Eom MK, Schumann P, Zhang X, Cao Y, Ge Y, Xiao M, Zhao J, Cheng C, Kim SG	Int J Syst Evol Microbiol	10.1099/ijsem.0.002341	2017

References

#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#66792	Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .
#67645	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 29501
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Cytobacillus solani (DSM 29501, CCTCC AB 2014277, FJAT-18043)

Name and taxonomic classification

Morphology

Culture and growth conditions

Culture medium

Culture temp

Physiology and metabolism

Oxygen tolerance

Spore formation

Isolation, sampling and environmental information

Isolation

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_001420595

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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