Name: Criibacterium bergeronii CCRI-22567
Creator: BacDive
License: https://creativecommons.org/licenses/by/4.0/

Strain identifier

BacDive ID: 160627

Type strain:

Species: Criibacterium bergeronii

Strain Designation: CCRI-22567

Culture col. no.: DSM 107614

Strain history: <- A. Maheux, Université Laval, Québec, Canada; CCRI-22567

NCBI tax ID(s): 1871336 (species)

SI-ID 397238

DSM 107614

Special Collections

DSMZ

Section

Criibacterium bergeronii CCRI-22567 is an anaerobe bacterium that was isolated from Vagina.

anaerobe
16S sequence
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Clostridia*
	Order	*Eubacteriales*
	Family	*Peptostreptococcaceae*
	Genus	*Criibacterium*
	Species	**Criibacterium bergeronii**
	Full Scientific Name (LPSN)	Criibacterium bergeronii Maheux et al. 2021

Information on culture and growth conditions Culture and growth conditions

[Ref.: #67535]

Culture medium

PYG MEDIUM (MODIFIED) (DSMZ Medium 104)

[Ref.: #67535]

Culture medium growth

[Ref.: #67535]

Culture medium link

Medium recipe at MediaDive

[Ref.: #67535]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #67535]			growth	37 °C

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]

Oxygen tolerance

anaerobe Confidence in %94.673

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67535]	Sample type/isolated from	Vagina
[Ref.: #67535]	Geographic location (country and/or sea, region)	Québec City (Qué)
[Ref.: #67535]	Country	Canada
[Ref.: #67535]	Country ISO 3 Code	CAN
[Ref.: #67535]	Continent	North America
* marker position based on {}

[Ref.: #69479]

Global distribution of 16S sequence MF547661 (>99% sequence identity) for Criibacterium bergeronii subclade from Microbeatlas

Aquatic Samples	140
Soil Samples	238
Animal Samples	13325
Plant Samples	50
Total Samples	13753

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

16S Sequence information:

	Sequence accession description	Seq. accession number	Sequence length (bp)	Sequence database	Associated NCBI tax ID
[Ref.: #67535]	Criibacterium bergeronii strain CCRI-22567 16S ribosomal RNA gene, partial sequence	MF547661	1450	GenBank ENA	1871336 tax ID

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Criibacterium bergeronii CCRI-22567	GCA_001693775	contig	GenBank ENA	1871336 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Model	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Criibacterium bergeronii CCRI-22567 NCBI: GCA_001693775.2
[Ref.: #69480]	gram-positive	gram-positiveⓘ	yes	62.712	no
[Ref.: #69480]	anaerobic	anaerobicⓘ	yes	94.673	no
[Ref.: #69480]	aerobic	aerobicⓘ	no	97.871	no
[Ref.: #69480]	spore-forming	spore-formingⓘ	no	67.591	no
[Ref.: #69480]	thermophilic	thermophileⓘ	no	82.534	no
[Ref.: #69480]	flagellated	motile2+ⓘ	yes	67.208	no

Availability in culture collections External links

[Ref.: #67535]

Culture collection no.

DSM 107614

[Ref.: #112865]

SI-ID 397238

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Criibacterium bergeronii gen. nov., sp. nov., a new member of the family Peptostreptococcaceae, isolated from human clinical samples.	Maheux AF, Boudreau DK, Abed JY, Berube E, Brodeur S, Bernard KA, Hashimi A, Ducrey E, Guay EF, Raymond F, Corbeil J, Domingo MC, Roy PH, Boissinot M, Tocheva EI, Omar RF	Int J Syst Evol Microbiol	10.1099/ijsem.0.004691	2021	*
Phylogeny	Draft Genome Sequence of Criibacterium bergeronii gen. nov., sp. nov., Strain CCRI-22567T, Isolated from a Vaginal Sample from a Woman with Bacterial Vaginosis.	Maheux AF, Berube E, Boudreau DK, Raymond F, Corbeil J, Roy PH, Boissinot M, Omar RF	Genome Announc	10.1128/genomeA.00959-16	2016	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67535

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 107614

#69479

João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#112865

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID397238.1 )

* These data were automatically processed and therefore are not curated

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