Name: Streptomyces bathyalis ASO4wet
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 160286

Type strain:

Species: Streptomyces bathyalis

Strain Designation: ASO4wet

Culture col. no.: DSM 106605, NCCB 100657

Strain history: <- J. Wink, HZI, Braunschweig, Germany; ASO4 <- W. Landwehr; ASO4

NCBI tax ID(s): 1931 (species)

SI-ID 398855

DSM 106605

Section

Streptomyces bathyalis ASO4wet is a spore-forming, mesophilic bacterium that was isolated from Sponge.

spore-forming
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Actinomycetota*
	Class	*Actinomycetes*
	Order	*Kitasatosporales*
	Family	*Streptomycetaceae*
	Genus	*Streptomyces*
	Species	**Streptomyces bathyalis**
	Full Scientific Name (LPSN)	Streptomyces bathyalis Risdian et al. 2021

Information on morphological and physiological properties Morphology

[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #69480]	Motility	no Confidence in %93.205

Multimedia content

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Caption:

Medium 65 28°C

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Intellectual property rights:

Information on culture and growth conditions Culture and growth conditions

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Culture medium

GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

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Culture medium composition

expand / minimize

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Culture medium

ROLLED OATS MINERAL MEDIUM (DSMZ Medium 84)

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Culture medium growth

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Culture medium link

Medium recipe at MediaDive

[Ref.: #67190]

Culture medium composition

expand / minimize

	Temperatures	Kind of temperature		Temperature
[Ref.: #67190]			growth	28 °C

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Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69480]	Ability of spore formation	yes Confidence in %100
[Ref.: #69481]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #67190]	Sample type/isolated from	Sponge
[Ref.: #67190]	Geographic location (country and/or sea, region)	Atlantic ocean, extended Continental shelf, near Madeira Islands (36° 15' 11.4'' N, 14° 32' 59.9'' W)
[Ref.: #67190]	Country	Portugal
[Ref.: #67190]	Country ISO 3 Code	PRT
[Ref.: #67190]	Continent	Europe
[Ref.: #67190]	Geographic location	36.2532°/-14.5500°
* marker position based on {}

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Streptomyces bathyalis ASO4wet	GCA_015910445	complete	GenBank	2710756 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Streptomyces bathyalis ASO4wet NCBI: GCA_015910445.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Streptomyces bathyalis ASO4wet NCBI: GCA_015910445.1
[Ref.: #69480]	flagellated	no	98.301	no
[Ref.: #69480]	gram-positive	yes	90.183	no
[Ref.: #69480]	anaerobic	no	98.862	no
[Ref.: #69480]	aerobic	yes	92.371	no
[Ref.: #69480]	halophile	no	83.523	no
[Ref.: #69480]	spore-forming	yes	91.879	no
[Ref.: #69480]	glucose-util	yes	90.314	no
[Ref.: #69480]	thermophile	no	96.948	yes
[Ref.: #69480]	motile	no	93.651	no
[Ref.: #69480]	glucose-ferment	no	91.078	no

Availability in culture collections External links

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Culture collection no.

DSM 106605, NCCB 100657

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SI-ID 398855

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Streptomyces bathyalis sp. nov., an actinobacterium isolated from the sponge in a deep sea.	Risdian C, Landwehr W, Rohde M, Schumann P, Hahnke RL, Sproer C, Bunk B, Kampfer P, Schupp PJ, Wink J	Antonie Van Leeuwenhoek	10.1007/s10482-021-01528-4	2021	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#67190

Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 106605

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#112549

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID398855.1 )

* These data were automatically processed and therefore are not curated

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