Name: Paenibacillus lupini RLAHU15
Creator: BacDive
License: http://creativecommons.org/licenses/by-nc/4.0/

Strain identifier

BacDive ID: 139555

Type strain:

Species: Paenibacillus lupini

Strain Designation: RLAHU15

Culture col. no.: CIP 110988, LMG 27296, CECT 8235

Strain history: CIP <- 2015, E. Velazquez, Salamanca Univ., Salamanca, Spain: strain RLAHU15

NCBI tax ID(s): 1450204 (species)

SI-ID 382427

LMG 27296, CECT 8235, CIP 110988

Section

Paenibacillus lupini RLAHU15 is a spore-forming, mesophilic, motile bacterium of the family Paenibacillaceae.

motile
spore-forming
mesophilic
Bacteria
genome sequence

Information on the name and the taxonomic classification. Name and taxonomic classification

	Last LPSN update	14-12-2023 (DD-MM-YYYY)
	Domain	"Bacteria"
	Phylum	*Bacillota*
	Class	*Bacilli*
	Order	*Caryophanales*
	Family	*Paenibacillaceae*
	Genus	*Paenibacillus*
	Species	**Paenibacillus lupini**
	Full Scientific Name (LPSN)	Paenibacillus lupini Carro et al. 2014

Information on morphological and physiological properties Morphology

[Ref.: #41939]	Gram stain	positive
[Ref.: #69480]	Gram stain	positive Confidence in %100

[Ref.: #41939]	Cell shape	rod-shaped

[Ref.: #41939]	Motility	yes
[Ref.: #69480]	Motility	yes Confidence in %98.627

Information on culture and growth conditions Culture and growth conditions

[Ref.: #41939]

Culture medium

MEDIUM 72- for trypto casein soja agar

[Ref.: #41939]

Culture medium growth

[Ref.: #41939]

Culture medium composition

expand / minimize

[Ref.: #41939]

Culture medium

CIP Medium 72

[Ref.: #41939]

Culture medium growth

[Ref.: #41939]

Culture medium link

Medium recipe provided by DSMZ

	Temperatures	Kind of temperature		Temperature
[Ref.: #41939]			growth	37 °C

[Ref.: #41939]

Temperature range

mesophilic

Information on physiology and metabolism Physiology and metabolism

[Ref.: #69481]	Ability of spore formation	yes Confidence in %100
[Ref.: #69480]	Ability of spore formation	yes Confidence in %100

Information on isolation source, the sampling and environmental conditions Isolation, sampling and environmental information

[Ref.: #41939]	Sample type/isolated from	Nodules, Lupinus albus
[Ref.: #41939]	Geographic location (country and/or sea, region)	Riego de la Vega, Leon, Spain
[Ref.: #41939]	Country	Spain
[Ref.: #41939]	Country ISO 3 Code	ESP
[Ref.: #41939]	Continent	Europe
[Ref.: #41939]	Isolation date	2010-01-04

[Ref.: #41939]	Country	Spain
[Ref.: #41939]	Country ISO 3 Code	ESP
[Ref.: #41939]	Continent	Europe
* marker position based on {}

Information on possible application of the strain and its possible interaction with e.g. potential hosts Safety information

[Ref.: #41939]

Biosafety level

Risk group (French classification)

Information on genomic background e.g. entries in nucleic sequence databass Sequence information

Genome sequence information:

	Sequence accession description	Seq. accession number	Assembly level	Sequence database	Associated NCBI tax ID
[Ref.: #66792]	Paenibacillus lupini CECT 8235	GCA_011761355	scaffold	GenBank	1450204 tax ID	*
[Ref.: #66792]	Paenibacillus lupini strain CECT 8235	1450204.3	wgs	PATRIC	1450204 tax ID	*
[Ref.: #66792]	Paenibacillus lupini CECT 8235	2824449328	draft	JGI IMG/M	1450204 tax ID	*

Data predicted using genome information as a basis Genome-based predictions

	Trait	Prediction	Confidence in %	In training data
	Predictions from GenomeNet Sporulation v. 1 based on: Paenibacillus lupini CECT 8235 NCBI: GCA_011761355.1
[Ref.: #69481]	spore-forming	yes	100	no

	Trait	Prediction	Confidence in %	In training data
	Predictions from Diaspora project based on: Paenibacillus lupini CECT 8235 NCBI: GCA_011761355.1
[Ref.: #69480]	motile	yes	89.387	no
[Ref.: #69480]	flagellated	yes	83.541	no
[Ref.: #69480]	gram-positive	yes	85.983	no
[Ref.: #69480]	anaerobic	no	99.288	no
[Ref.: #69480]	aerobic	yes	91.902	no
[Ref.: #69480]	halophile	no	94.647	no
[Ref.: #69480]	spore-forming	yes	93.145	no
[Ref.: #69480]	glucose-util	yes	88.955	no
[Ref.: #69480]	thermophile	no	99.693	yes
[Ref.: #69480]	glucose-ferment	no	91.004	no

Availability in culture collections External links

[Ref.: #41939]

Culture collection no.

CIP 110988, LMG 27296, CECT 8235

[Ref.: #96035]

SI-ID 382427

Literature:

Topic	Title	Authors	Journal	DOI	Year
Phylogeny	Paenibacillus lupini sp. nov., isolated from nodules of Lupinus albus.	Carro L, Flores-Felix JD, Ramirez-Bahena MH, Garcia-Fraile P, Martinez-Hidalgo P, Igual JM, Tejedor C, Peix A, Velazquez E	Int J Syst Evol Microbiol	10.1099/ijs.0.060830-0	2014	*

References

#20215

Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )

#41939 Collection of Institut Pasteur ; Curators of the CIP; CIP 110988

#66792

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69480

Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann: Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) .

#69481

Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch: Predictions based on the model GenomeNet Sporulation v. 1 . ( DOI 10.21203/rs.3.rs-2527258/v1 )

#96035

Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.: StrainInfo: A central database for resolving microbial strain identifiers . ( DOI 10.60712/SI-ID382427.1 )

* These data were automatically processed and therefore are not curated

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Paenibacillus lupini CECT 8235

Paenibacillus lupini CECT 8235

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