Paenibacillus thiaminolyticus (DSM 7262, JCM 8360, NRRL B-4156)

Name: Paenibacillus thiaminolyticus (DSM 7262, JCM 8360, NRRL B-4156)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 11502

Type strain

Strain Designation 1393

Culture col. no. DSM 7262 JCM 8360 NRRL B-4156 CCUG 28880 NCTC 12999 11 more

NCBI tax ID(s) 1349794 49283

Special Collections DSMZ CCUG JCM KCTC CIP

History <- NRRL <- Y. T. Sasaki, AHU 1392 AHU 1393. CIP <- 1995, JCM <- AHU: strain 1393

Links

Paenibacillus thiaminolyticus 1393 is a facultative anaerobe, spore-forming, Gram-positive bacterium of the family Paenibacillaceae.

spore-forming Gram-positive motile rod-shaped facultative anaerobe genome sequence 16S sequence Bacteria

Name and taxonomic classification

SI-ID 9980

LMG 17412,CCUG 28880,DSM 7262,IFO 15656,JCM 8360,LMG 17404,NCIMB 13158,NRRL B-4156,CIP 104430,KCTC 3764,NBRC 15656,NCTC 12999,BCRC 17381,CCRC 17381

@ref 20215

Last LPSN update 2026-02-09 11:20:34

Domain Bacteria

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Paenibacillaceae

Genus Paenibacillus

Species Paenibacillus thiaminolyticus

Full scientific name Paenibacillus thiaminolyticus (Nakamura 1990 ex Kuno 1951) Shida et al. 1997

Synonyms (1)

Bacillus thiaminolyticus

BacDive ID	Other strains from **Paenibacillus thiaminolyticus** (6)	Type strain
11498	P. thiaminolyticus DSM 5711, ATCC 11377, ATCC 1953, NRS 1444
11499	P. thiaminolyticus DSM 5712, NRS 1591
11500	P. thiaminolyticus 1393, DSM 5713, NRS 1592
11501	P. thiaminolyticus DSM 5748, NRS 1675
139246	P. thiaminolyticus CIP 104429, IAM 1034, JCM 7540, CCM 3599, ...
165553	P. thiaminolyticus JCM 7538, NIAH 1025, NRRL B-14623

Morphology

Cell morphology

@ref	Gram stain	Cell shape	Motility	Confidence
123520	positive	rod-shaped
125439				91

Colony morphology

123520

Hemolysis ability1

Culture and growth conditions

Culture medium

@ref	Name	Medium link	Composition
3081	NUTRIENT AGAR (OXOID CM3) (DSMZ Medium 605)	Medium recipe at MediaDive	Name: NUTRIENT AGAR (OXOID CM3) (DSMZ Medium 605) Composition: Agar 15.0 g/l NaCl 5.0 g/l Peptone 5.0 g/l Yeast extract 2.0 g/l Lab-Lemco beef extract 1.0 g/l Distilled water
41374	MEDIUM 3 - Columbia agar		Columbia agar (39.000 g);distilled water (1000.000 ml)
123520	CIP Medium 3	Medium recipe at CIP

Culture temp

@ref	Growth	Type	Temperature (°C)
3081	positive	growth	30
41374	positive	growth	30
67770	positive	growth	30
123520	positive	growth	30-45
123520	negative	growth	10
123520	negative	growth	55

Culture pH

@ref	Ability	Type	PH
123520	positive	growth	6

Physiology and metabolism

Oxygen tolerance

123520

Oxygen tolerancefacultative anaerobe

Spore formation

@ref	Spore formation	Confidence
123520
125439		93.8
125438		91.888

Halophily

@ref	Salt	Growth	Tested relation	Concentration
123520	NaCl	positive	growth	0-4 %
123520	NaCl		growth	6 %
123520	NaCl		growth	8 %
123520	NaCl		growth	10 %

Metabolite utilization

@ref	Chebi-ID	Metabolite	Utilization activity	Kind of utilization tested
68371	27613 ChEBI	amygdalin	+	builds acid from	from API 50CH acid
68371	18305 ChEBI	arbutin	+	builds acid from	from API 50CH acid
68371	17057 ChEBI	cellobiose	+	builds acid from	from API 50CH acid
123520	16947 ChEBI	citrate	+	carbon source
68371	17108 ChEBI	D-arabinose	-	builds acid from	from API 50CH acid
68371	18333 ChEBI	D-arabitol	-	builds acid from	from API 50CH acid
68371	15824 ChEBI	D-fructose	+	builds acid from	from API 50CH acid
68371	28847 ChEBI	D-fucose	-	builds acid from	from API 50CH acid
68371	17634 ChEBI	D-glucose	+	builds acid from	from API 50CH acid
68371	62318 ChEBI	D-lyxose	-	builds acid from	from API 50CH acid
68371	16899 ChEBI	D-mannitol	-	builds acid from	from API 50CH acid
68371	16024 ChEBI	D-mannose	+	builds acid from	from API 50CH acid
68371	16988 ChEBI	D-ribose	+	builds acid from	from API 50CH acid
68371	17924 ChEBI	D-sorbitol	-	builds acid from	from API 50CH acid
68371	16443 ChEBI	D-tagatose	-	builds acid from	from API 50CH acid
68371	65327 ChEBI	D-xylose	-	builds acid from	from API 50CH acid
68371	17113 ChEBI	erythritol	-	builds acid from	from API 50CH acid
68371	4853 ChEBI	esculin	+	builds acid from	from API 50CH acid
68371	16813 ChEBI	galactitol	-	builds acid from	from API 50CH acid
68371	28066 ChEBI	gentiobiose	+	builds acid from	from API 50CH acid
68371	24265 ChEBI	gluconate	+	builds acid from	from API 50CH acid
68371	17754 ChEBI	glycerol	+	builds acid from	from API 50CH acid
68371	28087 ChEBI	glycogen	+	builds acid from	from API 50CH acid
68371	15443 ChEBI	inulin	-	builds acid from	from API 50CH acid
68371	30849 ChEBI	L-arabinose	-	builds acid from	from API 50CH acid
68371	18403 ChEBI	L-arabitol	-	builds acid from	from API 50CH acid
68371	62345 ChEBI	L-rhamnose	-	builds acid from	from API 50CH acid
68371	17266 ChEBI	L-sorbose	-	builds acid from	from API 50CH acid
68371	65328 ChEBI	L-xylose	-	builds acid from	from API 50CH acid
68371	17716 ChEBI	lactose	-	builds acid from	from API 50CH acid
68371	17306 ChEBI	maltose	+	builds acid from	from API 50CH acid
68371	6731 ChEBI	melezitose	+	builds acid from	from API 50CH acid
68371	28053 ChEBI	melibiose	+	builds acid from	from API 50CH acid
68371	320061 ChEBI	methyl alpha-D-glucopyranoside	+	builds acid from	from API 50CH acid
68371	43943 ChEBI	methyl alpha-D-mannoside	-	builds acid from	from API 50CH acid
68371	74863 ChEBI	methyl beta-D-xylopyranoside	-	builds acid from	from API 50CH acid
68371	59640 ChEBI	N-acetylglucosamine	+	builds acid from	from API 50CH acid
123520	17632 ChEBI	nitrate	+	reduction
123520	17632 ChEBI	nitrate	+	respiration
123520	16301 ChEBI	nitrite	-	reduction
68371		Potassium 2-ketogluconate	-	builds acid from	from API 50CH acid
68371		Potassium 5-ketogluconate	-	builds acid from	from API 50CH acid
68371	16634 ChEBI	raffinose	+	builds acid from	from API 50CH acid
68371	15963 ChEBI	ribitol	-	builds acid from	from API 50CH acid
68371	17814 ChEBI	salicin	+	builds acid from	from API 50CH acid
68371	28017 ChEBI	starch	+	builds acid from	from API 50CH acid
68371	17992 ChEBI	sucrose	+	builds acid from	from API 50CH acid
68371	27082 ChEBI	trehalose	+	builds acid from	from API 50CH acid
68371	32528 ChEBI	turanose	+	builds acid from	from API 50CH acid
68371	17151 ChEBI	xylitol	-	builds acid from	from API 50CH acid

Metabolite production

@ref	Chebi-ID	Metabolite	Production
123520	35581 ChEBI	indole

Enzymes

@ref	Value	Activity	Ec
68382	acid phosphatase	+	3.1.3.2	from API zym
123520	alcohol dehydrogenase	-	1.1.1.1
68382	alkaline phosphatase	+	3.1.3.1	from API zym
68382	alpha-chymotrypsin	-	3.4.21.1	from API zym
68382	alpha-fucosidase	+	3.2.1.51	from API zym
68382	alpha-galactosidase	-	3.2.1.22	from API zym
68382	alpha-glucosidase	-	3.2.1.20	from API zym
68382	alpha-mannosidase	-	3.2.1.24	from API zym
123520	amylase	+
68382	beta-galactosidase	+	3.2.1.23	from API zym
68382	beta-glucosidase	+	3.2.1.21	from API zym
68382	beta-glucuronidase	-	3.2.1.31	from API zym
123520	caseinase	+	3.4.21.50
123520	catalase	+	1.11.1.6
68382	cystine arylamidase	+	3.4.11.3	from API zym
123520	DNase	+
68382	esterase (C 4)	+		from API zym
68382	esterase lipase (C 8)	+		from API zym
123520	gelatinase	+
123520	lecithinase	-
68382	leucine arylamidase	+	3.4.11.1	from API zym
68382	lipase (C 14)	-		from API zym
123520	lysine decarboxylase	-	4.1.1.18
68382	N-acetyl-beta-glucosaminidase	-	3.2.1.52	from API zym
68382	naphthol-AS-BI-phosphohydrolase	+		from API zym
123520	ornithine decarboxylase	-	4.1.1.17
123520	oxidase	+
68382	trypsin	-	3.4.21.4	from API zym
123520	urease	+	3.5.1.5
68382	valine arylamidase	-		from API zym

API zym

@ref	Control	Alkaline phosphatase	Esterase (C 4)	2-naphtyl caprylateEsterase Lipase (C 8)	Lipase (C 14)	L-leucyl-2-naphthylamideLeucine arylamidase	L-valyl-2-naphthylamideValine arylamidase	L-cystyl-2-naphthylamideCystine arylamidase	Trypsin	alpha- Chymotrypsin	Acid phosphatase	Naphthol-AS-BI-phosphateNaphthol-AS-BI-phosphohydrolase	alpha- Galactosidase	beta- Galactosidase	beta- Glucuronidase	alpha- Glucosidase	beta- Glucosidase	N-acetyl-beta- glucosaminidase	alpha- Mannosidase	alpha- Fucosidase
123520	-	+	+	+	-	+	-	+	-	-	+	+	-	+	-	-	+	-	-	+

API 50CHac

@ref	ControlQ	GLY	ERY	DARA	LARA	RIB	DXYL	LXYL	ADO	MDX	GAL	GLU	FRU	MNE	SBE	RHA	DUL	INO	MAN	SOR	MDM	MDG	NAG	AMY	ARB	ESC	SAL	CEL	MAL	LAC	MEL	SAC	TRE	INU	MLZ	RAF	AMD	GLYG	XLT	GEN	TUR	LYX	TAG	DFUC	LFUC	DARL	LARL	GNT	2KG	5KG
123520	not determinedn.d.	+	-	-	-	+	-	-	-	-	+/-	+	+	+	-	-	-	+/-	-	-	-	+	+	+	+	+	+	+	+	-	+	+	+	-	+	+	+	+	-	+	+	-	-	-	+/-	-	-	+	-	-

API biotype100

@ref	ControlQ	D-glucose as carbon sourceGLU	D-fructose as carbon sourceFRU	D-galactose as carbon sourceGAL	D-trehalose as carbon sourceTRE	D-mannose as carbon sourceMNE	L-sorbose as carbon sourceSBE	D-melibiose as carbon sourceMEL	sucrose as carbon sourceSAC	D-raffinose as carbon sourceRAF	maltotriose as carbon sourceMTE	maltose as carbon sourceMAL	lactose as carbon sourceLAC	lactulose as carbon sourceLTE	1-O-methyl-beta-galactopyranoside as carbon sourceMbGa	1-O-methyl-alpha-galactopyranoside as carbon sourceMaGa	D-cellobiose as carbon sourceCEL	gentiobiose as carbon sourceGEN	1-O-methyl-beta-D-glucopyranoside as carbon sourceMbGu	esculin as carbon sourceESC	D-ribose as carbon sourceRIB	L-arabinose as carbon sourceARA	D-xylose as carbon sourceXYL	palatinose as carbon sourcePLE	L-rhamnose as carbon sourceRHA	L-fucose as carbon sourceFUC	D-melezitose as carbon sourceMLZ	D-arabitol as carbon sourceDARL	L-arabitol as carbon sourceLARL	xylitol as carbon sourceXLT	dulcitol as carbon sourceDUL	D-tagatose as carbon sourceTAG	glycerol as carbon sourceGLY	myo-inositol as carbon sourceINO	D-mannitol as carbon sourceMAN	maltitol as carbon sourceMTL	D-turanose as carbon sourceTUR	D-sorbitol as carbon sourceSOR	adonitol as carbon sourceADO	hydroxyquinoline-beta-glucuronide as carbon sourceHBG	D-lyxose as carbon sourceLYX	i-erythritol as carbon sourceERY	1-O-methyl-alpha-D-glucoside as carbon sourceMDG	3-O-methyl-D-glucose as carbon source3MDG	D-saccharate as carbon sourceSAT	mucate as carbon sourceMUC	L-tartrate as carbon sourceLTAT	D-tartrate as carbon sourceDTAT	meso-tartrate as carbon sourceMTAT	D-malate as carbon sourceDMLT	L-malate as carbon sourceLMLT	cis-aconitate as carbon sourceCATE	trans-aconitate as carbon sourceTATE	tricarballylate as carbon sourceTTE	citrate as carbon sourceCIT	D-glucuronate as carbon sourceGRT	D-galacturonate as carbon sourceGAT	2-ketogluconate as carbon source2KG	5-ketogluconate as carbon source5KG	tryptophan as carbon sourceTRY	N-acetyl-D-glucosamine as carbon sourceNAG	D-gluconate as carbon sourceGNT	phenylacetate as carbon sourcePAC	protocatechuate as carbon sourcePAT	4-hydroxybenzoate as carbon sourcepOBE	quinate as carbon sourceQAT	gentisate as carbon sourceGTE	3-hydroxybenzoate as carbon sourcemOBE	benzoate as carbon sourceBAT	3-phenylpropionate as carbon sourcePPAT	m-coumarate as carbon sourceCMT	trigonelline as carbon sourceTGE	betaine as carbon sourceBET	putrescine as carbon sourcePCE	4-aminobutyrate as carbon sourceABT	histamine as carbon sourceHIN	DL-lactate as carbon sourceLAT	caprate as carbon sourceCAP	caprylate as carbon sourceCYT	L-histidine as carbon sourceHIS	succinate as carbon sourceSUC	fumarate as carbon sourceFUM	glutarate as carbon sourceGRE	DL-glycerate as carbon sourceGYT	5-aminovalerate as carbon sourceAVT	ethanolamine as carbon sourceETN	tryptamine as carbon sourceTTN	D-glucosamine as carbon sourceGLN	itaconate as carbon sourceITA	3-hydroxybutyrate as carbon source3OBU	L-aspartate as carbon sourceAPT	L-glutamate as carbon sourceGTT	L-proline as carbon sourcePRO	D-alanine as carbon sourceDALA	L-alanine as carbon sourceLALA	L-serine as carbon sourceSER	malonate as carbon sourceMNT	propionate as carbon sourcePROP	L-tyrosine as carbon sourceTYR	2-ketoglutarate as carbon source2KT
123520	not determinedn.d.	-	+	+	+	-	+	-	+	-	-	+	+	-	+	-	-	-	-	+	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-	-

Isolation, sampling and environmental information

Taxonmaps

69479

Global distribution of 16S sequence LC177209 (>99% sequence identity) for Paenibacillus from Microbeatlas

Aquatic Samples	31
Soil Samples	565
Animal Samples	121
Plant Samples	31
Total Samples	748

Interaction and safety

Risk assessment

@ref	Pathogenicity human	Biosafety level	Biosafety level comment
3081	yes, in single cases	1	Risk group (German classification) According to TRBA 466
123520		1	Risk group (French classification) According to TRBA 466

Sequence information

Genome sequences

@ref	Description	Assembly level	INSDC accession	BV-BRC accession	IMG accession	NCBI tax ID	Score
67770	ASM706608v1 assembly for Paenibacillus thiaminolyticus NRRL B-4156	chromosome	GCA_007066085	49283.16	8005880292	49283	88.27
67770	ASM216185v1 assembly for Paenibacillus thiaminolyticus NRRL B-4156	contig	GCA_002161855	49283.4	2907177790	49283	68.65
67770	ASM400100v1 assembly for Paenibacillus thiaminolyticus NBRC 15656 = DSM 7262	contig	GCA_004001005	1349794.4		1349794	40.21

16S sequences

@ref	Description	Accession	Length	NCBI tax ID
20218	Paenibacillus thiaminolyticus partial 16S rRNA gene, strain DSM 7262T	AJ320490	1509	49283
20218	Paenibacillus thiaminolyticus gene for 16S rRNA, partial sequence	AB006939	280	49283
20218	Paenibacillus thiaminolyticus gene for 16S rRNA, partial sequence	AB073197	1502	49283
20218	Paenibacillus thiaminolyticus DNA for 16S rRNA	D78475	1435	49283
20218	Paenibacillus thiaminolyticus gene for 16S rRNA, partial sequence, strain: NBRC 15656	AB680934	1477	49283
67770	Paenibacillus thiaminolyticus gene for 16S ribosomal RNA, partial sequence, strain: JCM 8360	LC177209	1474	49283
124043	Paenibacillus thiaminolyticus strain DSM 7262 16S ribosomal RNA gene, partial sequence.	OR461521	700	49283
124043	Paenibacillus thiaminolyticus strain DSM 7262 16S ribosomal RNA gene, partial sequence.	OR461522	878	49283
124043	Paenibacillus thiaminolyticus strain NBRC 15656 16S ribosomal RNA gene, partial sequence.	OR461813	696	49283
124043	Paenibacillus thiaminolyticus strain NBRC 15656 16S ribosomal RNA gene, partial sequence.	OR462025	905	49283
124043	Paenibacillus thiaminolyticus strain DSM 7262 16S ribosomal RNA gene, partial sequence.	OR462033	674	49283

GC content

@ref	GC-content (mol%)	Method
67770	52	Buoyant density centrifugation (BD)

Genome-based predictions

Predictions

Predictions from Deep Learning for Genome Sequence Data. R package version 0.3.1 based on: Paenibacillus thiaminolyticus NBRC 15656 = DSM 7262
NCBI: GCA_004001005

@ref	Trait	Model	Prediction	Confidence in %	In training data
125439	spore_formation	BacteriaNetⓘ	yes	93.80	no
125439	motility	BacteriaNetⓘ	yes	91.00	no
125439	gram_stain	BacteriaNetⓘ	variable	86.50	no
125439	oxygen_tolerance	BacteriaNetⓘ	aerobe	83.90	no

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Paenibacillus thiaminolyticus NBRC 15656
PATRIC: 1349794.4

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	yes	61.04	no
125438	anaerobic	anaerobicⓘ	no	94.78	yes
125438	spore-forming	spore-formingⓘ	yes	91.89	no
125438	aerobic	aerobicⓘ	yes	51.62	no
125438	thermophilic	thermophileⓘ	no	91.21	no
125438	flagellated	motile2+ⓘ	yes	81.54	no

Literature

Topic	Title	Authors	Journal	DOI	Year
	Ecology and Pathogenicity for Honey Bee Brood of Recently Described Paenibacillus melissococcoides and Comparison With Paenibacillus dendritiformis, Paenibacillus thiaminolyticus.	Ory F, Dainat B, Wurgler O, Wenger F, Roetschi A, Braillard L, Charriere JD, Dietemann V.	Environ Microbiol Rep	10.1111/1758-2229.70089	2025
	New reference genomes of honey bee-associated bacteria Paenibacillus melissococcoides, Paenibacillus dendritiformis, and Paenibacillus thiaminolyticus.	Dainat B, Oberhaensli S, Ory F, Dietemann V.	Microbiol Resour Announc	10.1128/mra.00209-23	2023
Enzymology	Case report: Paenibacillus thiaminolyticus: a new cause of human infection, inducing bacteremia in a patient on hemodialysis.	Ouyang J, Pei Z, Lutwick L, Dalal S, Yang L, Cassai N, Sandhu K, Hanna B, Wieczorek RL, Bluth M, Pincus MR.	Ann Clin Lab Sci		2008
Genetics	Unveiling a New Antimicrobial Peptide with Efficacy against P. aeruginosa and K. pneumoniae from Mangrove-Derived Paenibacillus thiaminolyticus NNS5-6 and Genomic Analysis.	Sermkaew N, Atipairin A, Krobthong S, Aonbangkhen C, Yingchutrakul Y, Uchiyama J, Songnaka N.	Antibiotics (Basel)	10.3390/antibiotics13090846	2024
Genetics	Identification and characterization of a novel aminoglycoside O-nucleotidyltransferase ANT(6)-If from Paenibacillus thiaminolyticus PATH554.	Lu J, Sha Y, Gao M, Shi W, Lin X, Li K, Bao Q, Feng C.	Front Microbiol	10.3389/fmicb.2023.1184349	2023
Genetics	Mining biosynthetic gene clusters in Paenibacillus genomes to discover novel antibiotics	Kim M, Jeong D, Jang J, Jang J, Choi S.	BMC Microbiol		2024
	Type IV Pili Are a Critical Virulence Factor in Clinical Isolates of Paenibacillus thiaminolyticus.	Hehnly C, Shi A, Ssentongo P, Zhang L, Isaacs A, Morton SU, Streck N, Erdmann-Gilmore P, Tolstoy I, Townsend RR, Limbrick DD, Paulson JN, Ericson JE, Galperin MY, Schiff SJ, Broach JR.	mBio	10.1128/mbio.02688-22	2022
	Promiscuity of lanthipeptide enzymes: new challenges and applications.	Garcia-Ausencio C, Guzman-Chavez F, Rodriguez-Sanoja R, Sanchez S.	World J Microbiol Biotechnol	10.1007/s11274-025-04505-5	2025
	Paenibacillus infection with frequent viral coinfection contributes to postinfectious hydrocephalus in Ugandan infants.	Paulson JN, Williams BL, Hehnly C, Mishra N, Sinnar SA, Zhang L, Ssentongo P, Mbabazi-Kabachelor E, Wijetunge DSS, von Bredow B, Mulondo R, Kiwanuka J, Bajunirwe F, Bazira J, Bebell LM, Burgoine K, Couto-Rodriguez M, Ericson JE, Erickson T, Ferrari M, Gladstone M, Guo C, Haran M, Hornig M, Isaacs AM, Kaaya BN, Kangere SM, Kulkarni AV, Kumbakumba E, Li X, Limbrick DD, Magombe J, Morton SU, Mugamba J, Ng J, Olupot-Olupot P, Onen J, Peterson MR, Roy F, Sheldon K, Townsend R, Weeks AD, Whalen AJ, Quackenbush J, Ssenyonga P, Galperin MY, Almeida M, Atkins H, Warf BC, Lipkin WI, Broach JR, Schiff SJ.	Sci Transl Med	10.1126/scitranslmed.aba0565	2020
	Refactoring and Heterologous Expression of Class III Lanthipeptide Biosynthetic Gene Clusters Lead to the Discovery of N,N-Dimethylated Lantibiotics from Firmicutes.	Xue D, Shang Z, Older EA, Zhong Z, Pulliam C, Peter K, Nagarkatti M, Nagarkatti P, Li YX, Li J.	ACS Chem Biol	10.1021/acschembio.2c00849	2023
Genetics	Correlational networking guides the discovery of unclustered lanthipeptide protease-encoding genes.	Xue D, Older EA, Zhong Z, Shang Z, Chen N, Dittenhauser N, Hou L, Cai P, Walla MD, Dong SH, Tang X, Tang X, Chen H, Nagarkatti P, Nagarkatti M, Li YX, Li J.	Nat Commun	10.1038/s41467-022-29325-1	2022
Genetics	Complete Genome Sequences of the Human Pathogen Paenibacillus thiaminolyticus Mbale and Type Strain P. thiaminolyticus NRRL B-4156.	Hehnly C, Zhang L, Paulson JN, Almeida M, von Bredow B, Wijetunge DSS, Galperin MY, Sheldon K, Schiff SJ, Broach JR	Microbiol Resour Announc	10.1128/MRA.00181-20	2020
Metabolism	Genomic insights into the thiamin metabolism of Paenibacillus thiaminolyticus NRRL B-4156 and P. apiarius NRRL B-23460.	Sannino D, Angert ER	Stand Genomic Sci	10.1186/s40793-017-0276-9	2017

References

#3081	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 7262
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#20218	Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.: StrainInfo introduces electronic passports for microorganisms.. Syst Appl Microbiol. 37: 42 - 50 2014 ( DOI 10.1016/j.syapm.2013.11.002 , PubMed 24321274 )
#41374	; Curators of the CIP;
#67770	Japan Collection of Microorganism (JCM) ; Curators of the JCM;
#68371	Automatically annotated from API 50CH acid .
#68382	Automatically annotated from API zym .
#69479	João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.: MicrobeAtlas 1.0 beta .
#123520	Collection of Institut Pasteur ; Curators of the CIP; CIP 104430
#124043	Isabel Schober, Julia Koblitz: Data extracted from sequence databases, automatically matched based on designation and taxonomy .
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#125439	Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy: deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 .
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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Paenibacillus thiaminolyticus (DSM 7262, JCM 8360, NRRL B-4156)

Name and taxonomic classification

Morphology

Cell morphology

Colony morphology

Culture and growth conditions

Culture medium

Culture temp

Culture pH

Physiology and metabolism

Oxygen tolerance

Spore formation

Halophily

Metabolite utilization

Metabolite production

Enzymes

API zym

API 50CHac

API biotype100

Isolation, sampling and environmental information

Taxonmaps

Interaction and safety

Risk assessment

Sequence information

Genome sequences

Genome browser: GCA_007066085

16S sequences

GC content

Genome-based predictions

Predictions

Literature

Literature

References

BacDive

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