Alkalicoccobacillus gibsonii (DSM 9729, PN 111, DP 182)

Name: Alkalicoccobacillus gibsonii (DSM 9729, PN 111, DP 182)
Creator: BacDive
License: http://creativecommons.org/licenses/by/4.0/

BacDive ID 1137

Type strain

Strain Designation PN 111, DP 182

Culture col. no. DSM 9729 PN 111 DP 182

NCBI tax ID(s) 79881

Special Collections DSMZ

Links

Alkalicoccobacillus gibsonii PN 111 is a mesophilic prokaryote of the family Bacillaceae.

mesophilic

Name and taxonomic classification

SI-ID 48685

DSM 9729

@ref 20215

Last LPSN update 2025-12-16 09:47:02

Domain Bacillati

Phylum Bacillota

Class Bacilli

Order Caryophanales

Family Bacillaceae

Genus Alkalicoccobacillus

Species Alkalicoccobacillus gibsonii

Full scientific name Alkalicoccobacillus gibsonii (Nielsen et al. 1995) Kim et al. 2023

Synonyms (3)

Shouchella gibsonii
Bacillus gibsonii
Alkalihalobacillus gibsonii

BacDive ID	Other strains from **Alkalicoccobacillus gibsonii** (6)	Type strain
1135	A. gibsonii PN 109, DSM 8722, ATCC 700164, CIP 104720, ... (type strain)
1136	A. gibsonii PN 110, H 55, DSM 9728
1138	A. gibsonii PN 112, J 102, DSM 9730
1139	A. gibsonii PN 133, J 26, DSM 9731
1140	A. gibsonii FR1-104con, DSM 30725
159361	A. gibsonii Arbex 2026, R9_B6_IIIA, DSM 110292

Morphology

Cell morphology

@ref	Gram stain	Confidence
125438	negative	99.75

Culture and growth conditions

Culture medium

@ref	Name	Growth	Medium link	Composition
3707	ALKALINE NUTRIENT AGAR (DSMZ Medium 31)		Medium recipe at MediaDive	Name: ALKALINE NUTRIENT AGAR (DSMZ Medium 31; with strain-specific modifications) Composition: Agar 15.0 g/l Na2CO3 anhydrous 5.3 g/l Peptone 5.0 g/l NaCl 5.0 g/l NaHCO3 4.2 g/l Meat extract 3.0 g/l Distilled water

Culture temp

@ref	Growth	Type	Temperature (°C)	Range
3707	positive	growth	30	mesophilic

Physiology and metabolism

Isolation, sampling and environmental information

Interaction and safety

Risk assessment

@ref	Biosafety level	Biosafety level comment
3707	1	Risk group (German classification) According to TRBA 466

Sequence information

GC content

3707

GC-content (mol%)41.1

Genome-based predictions

Predictions

Predictions from bacterial phenotypic traits through improved machine learning using high-quality, curated datasets based on: Escherichia coli strain PN111
PATRIC: 562.38590

@ref	Trait	Model	Prediction	Confidence in %	In training data
125438	gram-positive	gram-positiveⓘ	no	99.75	no
125438	anaerobic	anaerobicⓘ	no	97.29	no
125438	spore-forming	spore-formingⓘ	no	87.50	no
125438	aerobic	aerobicⓘ	no	68.13	no
125438	thermophilic	thermophileⓘ	no	98.50	no
125438	flagellated	motile2+ⓘ	yes	74.86	no

Literature

References

#3707	Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH ; Curators of the DSMZ; DSM 9729
#20215	Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.: List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ. IJSEM ( DOI 10.1099/ijsem.0.004332 )
#125438	Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann: Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets. 2024 ( DOI 10.1101/2024.08.12.607695 )
#126262	A. Lissin, I. Schober, J. F. Witte, H. Lüken, A. Podstawka, J. Koblitz, B. Bunk, P. Dawyndt, P. Vandamme, P. de Vos, J. Overmann, L. C. Reimer: StrainInfo—the central database for linked microbial strain identifiers. ( DOI 10.1093/database/baaf059 )

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