Strain identifier
BacDive ID: 956
Type strain: 
Species: Bacillus sp.
Strain Designation: PeC11
Strain history: <- A. Brune, MPI Inst. Terrestrial Microbiol., Marburg, Germany; PeC11 <- S. Hobbie, Univ. Konstanz, Germany
NCBI tax ID(s): 1409 (species)
version 8.1 (current version)
General
@ref: 17670
BacDive-ID: 956
DSM-Number: 24408
keywords: 16S sequence, Bacteria, mesophilic
description: Bacillus sp. PeC11 is a mesophilic bacterium that was isolated from digestive tract of Pachnoda ephippiata.
NCBI tax id
- NCBI tax id: 1409
- Matching level: species
strain history
- @ref: 17670
- history: <- A. Brune, MPI Inst. Terrestrial Microbiol., Marburg, Germany; PeC11 <- S. Hobbie, Univ. Konstanz, Germany
doi: 10.13145/bacdive956.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Bacillus
- species: Bacillus sp.
- full scientific name: Bacillus Cohn 1872 (Approved Lists 1980)
synonyms
@ref synonym 20215 Quasibacillus 20215 Pseudobacillus 20215 Maribacillus
@ref: 17670
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Bacillus
species: Bacillus sp.
full scientific name: Bacillus sp.
strain designation: PeC11
type strain: no
Culture and growth conditions
culture medium
- @ref: 17670
- name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514
- composition: Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 17670
- growth: positive
- type: growth
- temperature: 30
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 17670
- sample type: digestive tract of Pachnoda ephippiata
- host species: Pachnoda ephippiata
- country: Germany
- origin.country: DEU
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Arthropoda | #Insecta |
| #Host Body-Site | #Gastrointestinal tract |
taxonmaps
- @ref: 69479
- File name: preview.99_2877.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_292;97_834;98_2226;99_2877&stattab=map
- Last taxonomy: Mesobacillus
- 16S sequence: AM177061
- Sequence Identity:
- Total samples: 2499
- soil counts: 1008
- aquatic counts: 793
- animal counts: 580
- plant counts: 118
Sequence information
16S sequences
- @ref: 17670
- description: Bacillus sp. PeC11 partial 16S rRNA gene, strain PeC11
- accession: AM177061
- length: 1517
- database: ena
- NCBI tax ID: 361791
External links
@ref: 17670
culture collection no.: DSM 24408
straininfo link
- @ref: 70629
- straininfo: 397767
literature
- topic: Phylogeny
- Pubmed-ID: 26194116
- title: Bacillus stamsii sp. nov., a facultatively anaerobic sugar degrader that is numerically dominant in freshwater lake sediment.
- authors: Muller N, Scherag FD, Pester M, Schink B
- journal: Syst Appl Microbiol
- DOI: 10.1016/j.syapm.2015.06.004
- year: 2015
- mesh: Aerobiosis, Anaerobiosis, Bacillus/*classification/genetics/*isolation & purification/physiology, Bacterial Typing Techniques, Cluster Analysis, DNA, Archaeal/chemistry/genetics, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Fatty Acids/analysis, Fermentation, Geologic Sediments/*microbiology, Glucose/*metabolism, Lakes, Molecular Sequence Data, Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 17670 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 24408) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-24408 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 70629 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID397767.1 | StrainInfo: A central database for resolving microbial strain identifiers |