Strain identifier
BacDive ID: 8150
Type strain: 
Species: Alkanindiges hongkongensis
Strain Designation: HKU 9
Strain history: <- P. C. Y. Woo; HKU 9
NCBI tax ID(s): 208968 (species)
General
@ref: 6973
BacDive-ID: 8150
DSM-Number: 17557
keywords: 16S sequence, Bacteria, mesophilic, human pathogen
description: Alkanindiges hongkongensis HKU 9 is a mesophilic human pathogen that was isolated from pus of a parotid gland abscess in a patient with Warthin’s tumor.
NCBI tax id
- NCBI tax id: 208968
- Matching level: species
strain history
- @ref: 6973
- history: <- P. C. Y. Woo; HKU 9
doi: 10.13145/bacdive8150.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Moraxellaceae
- genus: Alkanindiges
- species: Alkanindiges hongkongensis
- full scientific name: Alkanindiges hongkongensis Woo et al. 2016
@ref: 6973
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Alkanindiges
species: Alkanindiges hongkongensis
full scientific name: Alkanindiges hongkongensis Woo et al. 2016
strain designation: HKU 9
type strain: yes
Culture and growth conditions
culture medium
- @ref: 6973
- name: COLUMBIA BLOOD AGAR (DSMZ Medium 429)
- growth: yes
- link: https://mediadive.dsmz.de/medium/429
- composition: Name: COLUMBIA BLOOD AGAR (DSMZ Medium 429) Composition: Horse blood 40.0 g/l Columbia agar base
culture temp
- @ref: 6973
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 6973
- sample type: pus of a parotid gland abscess in a patient with Warthin’s tumor
- country: Hong Kong
- origin.country: HKG
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Infection | #Patient | |
| #Host Body-Site | #Oral cavity and airways | |
| #Host Body-Site | #Other | #Abscess |
| #Host Body Product | #Fluids |
Safety information
risk assessment
- @ref: 6973
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 6973 | Alkanindiges hongkongensis 16S ribosomal RNA gene, partial sequence | AY251390 | 1396 | ena | 208968 |
| 6973 | Alkanindiges hongkongensis 16S ribosomal RNA gene, partial sequence | AY251391 | 1396 | ena | 208968 |
| 6973 | Alkanindiges hongkongensis strain HKU9 16S ribosomal RNA gene, partial sequence | AF543466 | 1396 | ena | 208968 |
GC content
- @ref: 6973
- GC-content: 46.9
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 6973
culture collection no.: DSM 17557, LMG 23171
straininfo link
| @ref | straininfo |
|---|---|
| 77553 | 289846 |
| 77554 | 297638 |
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 6973 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 17557) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-17557 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 77553 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID289846.1 | StrainInfo: A central database for resolving microbial strain identifiers | |
| 77554 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID297638.1 | StrainInfo: A central database for resolving microbial strain identifiers |