Strain identifier

BacDive ID: 8110

Type strain: No

Species: Acinetobacter pittii

Strain Designation: Tr III-636

Strain history: <- W. H. Traub

NCBI tax ID(s): 48296 (species)

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General

@ref: 3548

BacDive-ID: 8110

DSM-Number: 9318

keywords: genome sequence, Bacteria, mesophilic

description: Acinetobacter pittii Tr III-636 is a mesophilic bacterium that was isolated from wound swab.

NCBI tax id

  • NCBI tax id: 48296
  • Matching level: species

strain history

  • @ref: 3548
  • history: <- W. H. Traub

doi: 10.13145/bacdive8110.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Pseudomonadales
  • family: Moraxellaceae
  • genus: Acinetobacter
  • species: Acinetobacter pittii
  • full scientific name: Acinetobacter pittii Nemec et al. 2011

@ref: 3548

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Pseudomonadales

family: Moraxellaceae

genus: Acinetobacter

species: Acinetobacter pittii

full scientific name: Acinetobacter pittii Nemec et al. 2011

strain designation: Tr III-636

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
3548TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://mediadive.dsmz.de/medium/535Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
3548NUTRIENT AGAR (DSMZ Medium 1)yeshttps://mediadive.dsmz.de/medium/1Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
3548COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

culture temp

@refgrowthtypetemperaturerange
3548positivegrowth28mesophilic
3548positivegrowth30mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836925115malate+assimilation
6836917128adipate+assimilation
6836927689decanoate+assimilation
6836930849L-arabinose+assimilation
683695291gelatin-hydrolysis
683694853esculin-hydrolysis
6836916199urea-hydrolysis
6836929016arginine-hydrolysis
6836927897tryptophan-energy source

metabolite production

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68369
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68369cytochrome oxidase-1.9.3.1
68369gelatinase-
68369beta-glucosidase-3.2.1.21
68369urease-3.5.1.5
68369arginine dihydrolase-3.5.3.6

API 20NE

@refNO3TRPGLU_ FermADH ArgUREESCGELPNPGGLU_ AssimARAMNEMANNAGMALGNTCAPADIMLTCITPACOX
3548--------++-----+++++-
3548+-+-----+/-++/-+/-+/-+/-+/-+++++-

Isolation, sampling and environmental information

isolation

  • @ref: 3548
  • sample type: wound swab
  • country: Germany
  • origin.country: DEU
  • continent: Europe

isolation source categories

Cat1Cat2Cat3
#Infection#Patient#Swab
#Host Body-Site#Other#Wound

Safety information

risk assessment

  • @ref: 3548
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

Sequence information

Genome sequences

  • @ref: 66792
  • description: Acinetobacter pittii strain FDAARGOS 1397
  • accession: 48296.506
  • assembly level: complete
  • database: patric
  • NCBI tax ID: 48296

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
gram-positiveno96.843no
anaerobicno98.524no
halophileno87.061no
spore-formingno96.35no
glucose-utilno68.583no
aerobicyes94.436no
motileno89.715no
thermophileno99.922yes
flagellatedno92.125no
glucose-fermentno82.776no

External links

@ref: 3548

culture collection no.: DSM 9318

straininfo link

  • @ref: 77526
  • straininfo: 113260

Reference

@idauthorscataloguedoi/urltitle
3548Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 9318)https://www.dsmz.de/collection/catalogue/details/culture/DSM-9318
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
68369Automatically annotated from API 20NE
77526Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID113260.1StrainInfo: A central database for resolving microbial strain identifiers