Strain identifier
BacDive ID: 8056
Type strain: 
Species: Acinetobacter calcoaceticus
Strain Designation: IH9
Strain history: <- E. Velázquez, IRNASA-CSIC, Salamanca, Spain; IH9
NCBI tax ID(s): 471 (species)
version 9 (current version)
General
@ref: 8233
BacDive-ID: 8056
DSM-Number: 19654
keywords: 16S sequence, Bacteria
description: Acinetobacter calcoaceticus IH9 is a bacterium that was isolated from soil of grass rhizosphere.
NCBI tax id
- NCBI tax id: 471
- Matching level: species
strain history
- @ref: 8233
- history: <- E. Velázquez, IRNASA-CSIC, Salamanca, Spain; IH9
doi: 10.13145/bacdive8056.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Pseudomonadales
- family: Moraxellaceae
- genus: Acinetobacter
- species: Acinetobacter calcoaceticus
- full scientific name: Acinetobacter calcoaceticus (Beijerinck 1911) Baumann et al. 1968 (Approved Lists 1980)
synonyms
- @ref: 20215
- synonym: Micrococcus calcoaceticus
@ref: 8233
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Pseudomonadales
family: Moraxellaceae
genus: Acinetobacter
species: Acinetobacter calcoaceticus
full scientific name: Acinetobacter calcoaceticus (Beijerinck 1911) Baumann et al. 1968 emend. Bouvet and Grimont 1986
strain designation: IH9
type strain: no
Culture and growth conditions
culture medium
- @ref: 8233
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
- @ref: 8233
- growth: positive
- type: growth
- temperature: 28
Physiology and metabolism
metabolite utilization
| @ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
|---|---|---|---|---|
| 68369 | 25115 | malate | + | assimilation |
| 68369 | 17128 | adipate | + | assimilation |
| 68369 | 27689 | decanoate | + | assimilation |
| 68369 | 24265 | gluconate | - | assimilation |
| 68369 | 17306 | maltose | - | assimilation |
| 68369 | 59640 | N-acetylglucosamine | - | assimilation |
| 68369 | 16899 | D-mannitol | - | assimilation |
| 68369 | 16024 | D-mannose | - | assimilation |
| 68369 | 30849 | L-arabinose | + | assimilation |
| 68369 | 17634 | D-glucose | + | assimilation |
| 68369 | 5291 | gelatin | - | hydrolysis |
| 68369 | 4853 | esculin | - | hydrolysis |
| 68369 | 16199 | urea | - | hydrolysis |
| 68369 | 29016 | arginine | - | hydrolysis |
| 68369 | 17634 | D-glucose | + | fermentation |
| 68369 | 27897 | tryptophan | - | energy source |
| 68369 | 17632 | nitrate | - | reduction |
metabolite production
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- production: no
metabolite tests
- @ref: 68369
- Chebi-ID: 35581
- metabolite: indole
- indole test: -
enzymes
| @ref | value | activity | ec |
|---|---|---|---|
| 68369 | cytochrome oxidase | - | 1.9.3.1 |
| 68369 | gelatinase | - | |
| 68369 | beta-glucosidase | - | 3.2.1.21 |
| 68369 | urease | - | 3.5.1.5 |
| 68369 | arginine dihydrolase | - | 3.5.3.6 |
API 20NE
| @ref | NO3 | TRP | GLU_ Ferm | ADH Arg | URE | ESC | GEL | PNPG | GLU_ Assim | ARA | MNE | MAN | NAG | MAL | GNT | CAP | ADI | MLT | CIT | PAC | OX |
|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
| 8233 | - | - | + | - | - | - | - | - | + | + | - | - | - | - | - | + | + | + | + | + | - |
Isolation, sampling and environmental information
isolation
- @ref: 8233
- sample type: soil of grass rhizosphere
- country: Spain
- origin.country: ESP
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Soil |
| #Host | #Plants | #Herbaceous plants (Grass,Crops) |
| #Host Body-Site | #Plant | #Rhizosphere |
taxonmaps
- @ref: 69479
- File name: preview.99_95.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_8;96_11;97_38;98_86;99_95&stattab=map
- Last taxonomy: Acinetobacter
- 16S sequence: AY364536
- Sequence Identity:
- Total samples: 46266
- soil counts: 7889
- aquatic counts: 12125
- animal counts: 20278
- plant counts: 5974
Safety information
risk assessment
- @ref: 8233
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 8233
- description: Acinetobacter rhizosphaerae strain IH9 16S ribosomal RNA gene, partial sequence
- accession: AY364536
- length: 1531
- database: nuccore
- NCBI tax ID: 243922
External links
@ref: 8233
culture collection no.: DSM 19654
straininfo link
- @ref: 77484
- straininfo: 398413
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 8233 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19654) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-19654 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 68369 | Automatically annotated from API 20NE | |||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 77484 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID398413.1 | StrainInfo: A central database for resolving microbial strain identifiers |