Strain identifier

BacDive ID: 7584

Type strain: No

Species: Pseudoglutamicibacter albus

Strain Designation: CF44, CF 44

Strain history: CIP <- 2000, G. Wauters, UCL, Brussels, Belgium: strain CF 44

NCBI tax ID(s): 98671 (species)

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General

@ref: 4896

BacDive-ID: 7584

DSM-Number: 13069

keywords: Bacteria, aerobe, mesophilic, Gram-positive, rod-shaped

description: Pseudoglutamicibacter albus CF44 is an aerobe, mesophilic, Gram-positive bacterium that was isolated from human urine.

NCBI tax id

  • NCBI tax id: 98671
  • Matching level: species

strain history

@refhistory
4896<- G. Wauters; CF44
419232000, G. Wauters, UCL, Brussels, Belgium: strain CF 44
116201CIP <- 2000, G. Wauters, UCL, Brussels, Belgium: strain CF 44

doi: 10.13145/bacdive7584.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Micrococcales
  • family: Micrococcaceae
  • genus: Pseudoglutamicibacter
  • species: Pseudoglutamicibacter albus
  • full scientific name: Pseudoglutamicibacter albus (Wauters et al. 2000) Busse 2016

  • synonyms

    • @ref: 20215
    • synonym: Arthrobacter albus

@ref: 4896

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Micrococcaceae

genus: Pseudoglutamicibacter

species: Pseudoglutamicibacter albus

full scientific name: Pseudoglutamicibacter albus (Wauters et al. 2000) Busse 2016

strain designation: CF44, CF 44

type strain: no

Morphology

cell morphology

  • @ref: 116201
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: no

colony morphology

  • @ref: 116201

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
4896TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://mediadive.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
41923MEDIUM 45 - for Columbia agar with sheep bloodyesDistilled water make up to (1000.000 ml);Columbia agar (39.000 g);Sheepblood (100.000 ml)
116201CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72
116201CIP Medium 45yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=45

culture temp

@refgrowthtypetemperaturerange
4896positivegrowth30-37mesophilic
41923positivegrowth37mesophilic
56402positivegrowth30-42
116201positivegrowth25-41
116201nogrowth10psychrophilic
116201nogrowth15psychrophilic
116201nogrowth45thermophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
56402aerobe
116201obligate aerobe

halophily

@refsaltgrowthtested relationconcentration
116201NaClpositivegrowth0-6 %
116201NaClnogrowth10 %

murein

  • @ref: 4896
  • murein short key: A11.35
  • type: A4alpha L-Lys-L-Ala-L-Glu

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
11620116947citrate-carbon source
1162014853esculin-hydrolysis
11620117632nitrate-reduction
11620116301nitrite-reduction
11620117632nitrate-respiration
6837917632nitrate-reduction
683794853esculin-hydrolysis
6837916199urea-hydrolysis
683795291gelatin-hydrolysis
6837917634D-glucose-fermentation
6837916988D-ribose-fermentation
6837965327D-xylose-fermentation
6837916899D-mannitol-fermentation
6837917306maltose-fermentation
6837917716lactose-fermentation
6837917992sucrose-fermentation
6837928087glycogen-fermentation

antibiotic resistance

  • @ref: 116201
  • metabolite: 0129 (2,4-Diamino-6,7-di-iso-propylpteridine phosphate)
  • is antibiotic: yes
  • is sensitive: yes
  • is resistant: no

metabolite production

  • @ref: 116201
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
11620115688acetoin-
11620117234glucose-

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase-3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382cystine arylamidase-3.4.11.3
68382valine arylamidase-
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase-3.1.3.1
68379catalase+1.11.1.6
68379gelatinase-
68379urease-3.5.1.5
68379beta-glucosidase-3.2.1.21
68379N-acetyl-beta-glucosaminidase-3.2.1.52
68379alpha-glucosidase-3.2.1.20
68379beta-galactosidase-3.2.1.23
68379beta-glucuronidase-3.2.1.31
68379alkaline phosphatase+3.1.3.1
68379pyrrolidonyl arylamidase+3.4.19.3
68379pyrazinamidase+3.5.1.B15
116201oxidase+
116201beta-galactosidase-3.2.1.23
116201alcohol dehydrogenase-1.1.1.1
116201gelatinase+/-
116201amylase-
116201DNase-
116201caseinase+3.4.21.50
116201catalase+1.11.1.6
116201tween esterase-
116201gamma-glutamyltransferase-2.3.2.2
116201lecithinase-
116201lipase-
116201lysine decarboxylase-4.1.1.18
116201ornithine decarboxylase-4.1.1.17
116201phenylalanine ammonia-lyase+4.3.1.24
116201protease-
116201tryptophan deaminase-
116201urease-3.5.1.5

API coryne

@refNITPYZPYRAPALbeta GURbeta GALalpha GLUbeta NAGESCUREGELControlGLURIBXYLMANMALLACSACGLYGCAT
56402-+++----------------+

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
56402--++------++--------
116201--++-+--+-++--------

Isolation, sampling and environmental information

isolation

@refsample typecountryorigin.countrycontinentsampling dateisolation date
4896human urineBelgiumBELEurope
56402Human urineBelgiumBELEurope1984
116201Human, UrineBelgiumBELEurope1984

isolation source categories

Cat1Cat2Cat3
#Host#Human
#Host Body Product#Fluids#Urine

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
48962Risk group (German classification)
1162011Risk group (French classification)

External links

@ref: 4896

culture collection no.: DSM 13069, CCUG 44607, CIP 106790

straininfo link

  • @ref: 77028
  • straininfo: 49405

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
4896Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 13069)https://www.dsmz.de/collection/catalogue/details/culture/DSM-13069
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
41923Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/18959
56402Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 44607)https://www.ccug.se/strain?id=44607
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
68379Automatically annotated from API Coryne
68382Automatically annotated from API zym
77028Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID49405.1StrainInfo: A central database for resolving microbial strain identifiers
116201Curators of the CIPCollection of Institut Pasteur (CIP 106790)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20106790