Strain identifier
BacDive ID: 7224
Type strain: 
Species: Methylopila jiangsuensis
Strain Designation: JZL-4
Strain history: <- L. Li, Nanjing Agric. Univ., China; JZL-4
NCBI tax ID(s): 586230 (species)
version 8.1 (current version)
General
@ref: 16478
BacDive-ID: 7224
DSM-Number: 22718
keywords: genome sequence, 16S sequence, Bacteria, mesophilic
description: Methylopila jiangsuensis JZL-4 is a mesophilic bacterium that was isolated from activated sludge of waste water treatment plant of a synthetic pyrethroid factory.
NCBI tax id
- NCBI tax id: 586230
- Matching level: species
strain history
- @ref: 16478
- history: <- L. Li, Nanjing Agric. Univ., China; JZL-4
doi: 10.13145/bacdive7224.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Hyphomicrobiales
- family: Methylocystaceae
- genus: Methylopila
- species: Methylopila jiangsuensis
- full scientific name: Methylopila jiangsuensis Li et al. 2011
@ref: 16478
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Rhizobiales
family: Methylocystaceae
genus: Methylopila
species: Methylopila jiangsuensis
full scientific name: Methylopila jiangsuensis Li et al. 2011
strain designation: JZL-4
type strain: yes
Culture and growth conditions
culture medium
- @ref: 16478
- name: NUTRIENT AGAR (DSMZ Medium 1)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1
- composition: Name: NUTRIENT AGAR (DSMZ Medium 1; with strain-specific modifications) Composition: Agar 15.0 g/l None 10.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
- @ref: 16478
- growth: positive
- type: growth
- temperature: 28
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 16478
- sample type: activated sludge of waste water treatment plant of a synthetic pyrethroid factory
- geographic location: Jiangsu Province, Yangzhou
- country: China
- origin.country: CHN
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Industrial | |
| #Engineered | #Waste | #Activated sludge |
| #Engineered | #Waste | #Industrial wastewater |
| #Engineered | #Waste | #Water treatment plant |
Safety information
risk assessment
- @ref: 16478
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 16478
- description: Methylopila jiangsuensis strain JZL-4 16S ribosomal RNA gene, partial sequence
- accession: FJ502233
- length: 1451
- database: ena
- NCBI tax ID: 586230
Genome sequences
- @ref: 66792
- description: Methylopila jiangsuensis DSM 22718
- accession: 2861355207
- assembly level: draft
- database: img
- NCBI tax ID: 586230
GC content
- @ref: 16478
- GC-content: 70.4
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 16478
culture collection no.: DSM 22718, ACCC 05406, VKM B-2555
straininfo link
- @ref: 76676
- straininfo: 405786
literature
| topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
|---|---|---|---|---|---|---|---|---|
| Phylogeny | 20656805 | Methylopila jiangsuensis sp. nov., an aerobic, facultatively methylotrophic bacterium. | Li L, Zheng JW, Hang BJ, Doronina NV, Trotsenko YA, He J, Li SP | Int J Syst Evol Microbiol | 10.1099/ijs.0.020925-0 | 2010 | Base Composition, China, DNA, Bacterial/genetics, Fatty Acids/chemistry, Methylocystaceae/*classification/genetics/isolation & purification, Molecular Sequence Data, Nucleic Acid Hybridization, Phospholipids/chemistry, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Sewage/*microbiology, Ubiquinone/chemistry | Genetics |
| Phylogeny | 22984139 | Methylopila musalis sp. nov., an aerobic, facultatively methylotrophic bacterium isolated from banana fruit. | Doronina NV, Kaparullina EN, Bykova TV, Trotsenko YA | Int J Syst Evol Microbiol | 10.1099/ijs.0.042028-0 | 2012 | Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Ecuador, Fatty Acids/analysis, Fruit/microbiology, Genes, Bacterial, Methylocystaceae/*classification/genetics/isolation & purification, Molecular Sequence Data, Musa/*microbiology, Nucleic Acid Hybridization, Phospholipids/analysis, *Phylogeny, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, Ubiquinone/analysis | Genetics |
| Phylogeny | 25413715 | Methylopila henanense sp. nov., a novel methylotrophic bacterium isolated from tribenuron methyl-contaminated wheat soil. | Wang YN, Tian WY, He WH, Chen GC, An ML, Jia B, Liu L, Zhou Y, Liu SJ | Antonie Van Leeuwenhoek | 10.1007/s10482-014-0331-0 | 2014 | Aerobiosis, Arylsulfonates, Bacterial Typing Techniques, Base Composition, Carbon/metabolism, Cluster Analysis, Cytosol/chemistry, DNA, Bacterial/chemistry/genetics, DNA, Ribosomal/chemistry/genetics, Energy Metabolism, Enzymes/analysis, Fatty Acids/analysis, Flagella/physiology, Locomotion, Methylocystaceae/*classification/genetics/*isolation & purification/physiology, Microscopy, Electron, Transmission, Molecular Sequence Data, Nitrogen/metabolism, Nucleic Acid Hybridization, Phospholipids/analysis, Phylogeny, Quinones/analysis, RNA, Ribosomal, 16S/genetics, Sequence Analysis, DNA, *Soil Microbiology, Soil Pollutants, Triticum/growth & development | Metabolism |
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 16478 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22718) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-22718 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 76676 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID405786.1 | StrainInfo: A central database for resolving microbial strain identifiers |