Strain identifier
BacDive ID: 7079
Type strain: 
Species: Methanolobus taylorii
Strain Designation: GS-16
Strain history: <- OCM <- I.M. Mathrani <- R.S. Oremland, GS-16
NCBI tax ID(s): 38025 (species)
version 8.1 (current version)
General
@ref: 3459
BacDive-ID: 7079
DSM-Number: 9005
keywords: 16S sequence, Archaea, anaerobe, mesophilic
description: Methanolobus taylorii GS-16 is an anaerobe, mesophilic archaeon that was isolated from estuarine sediment.
NCBI tax id
- NCBI tax id: 38025
- Matching level: species
strain history
- @ref: 3459
- history: <- OCM <- I.M. Mathrani <- R.S. Oremland, GS-16
doi: 10.13145/bacdive7079.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Methanomicrobia
- order: Methanosarcinales
- family: Methanosarcinaceae
- genus: Methanolobus
- species: Methanolobus taylorii
- full scientific name: Methanolobus taylorii Oremland and Boone 1994
@ref: 3459
domain: Archaea
phylum: Euryarchaeota
class: Methanomicrobia
order: Methanosarcinales
family: Methanosarcinaceae
genus: Methanolobus
species: Methanolobus taylorii
full scientific name: Methanolobus taylorii Oremland and Boone 1994
strain designation: GS-16
type strain: yes
Culture and growth conditions
culture medium
- @ref: 3459
- name: METHANOHALOPHILUS OREGONESE MEDIUM (DSMZ Medium 490)
- growth: yes
- link: https://mediadive.dsmz.de/medium/490
- composition: Name: METHANOLOBUS OREGONENSIS MEDIUM (DSMZ Medium 490) Composition: Na2CO3 2.5 g/l Trimethylamine-HCl 2.0 g/l Yeast extract 2.0 g/l Trypticase peptone 2.0 g/l MgCl2 x 6 H2O 1.7 g/l KCl 1.5 g/l NH4Cl 1.0 g/l 2-Mercaptoethanesulfonic acid 0.5 g/l K2HPO4 x 3 H2O 0.4 g/l Na2S x 9 H2O 0.3 g/l MgSO4 x 7 H2O 0.03 g/l Nitrilotriacetic acid 0.015 g/l NaCl 0.01 g/l MnSO4 x H2O 0.005 g/l ZnSO4 x 7 H2O 0.0018 g/l CoSO4 x 7 H2O 0.0018 g/l FeSO4 x 7 H2O 0.001 g/l CaCl2 x 2 H2O 0.001 g/l Sodium resazurin 0.0005 g/l NiCl2 x 6 H2O 0.0003 g/l AlK(SO4)2 x 12 H2O 0.0002 g/l Na2MoO4 x 2 H2O 0.0001 g/l CuSO4 x 5 H2O 0.0001 g/l H3BO3 0.0001 g/l Na2WO4 x 2 H2O 4e-06 g/l Na2SeO3 x 5 H2O 3e-06 g/l Distilled water
culture temp
- @ref: 3459
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 3459
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 3459
- sample type: estuarine sediment
- geographic location: San Francisko Bay
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Estuary |
| #Environmental | #Aquatic | #Sediment |
| #Environmental | #Aquatic | #Brackish |
Safety information
risk assessment
- @ref: 3459
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Selenomonas sp. oral taxon 140 clone OCM058 16S ribosomal RNA gene, partial sequence | GU403167 | 469 | ena | 671225 |
| 3459 | Methanolobus taylorii 16S small subunit rRNA, partial sequence | U20154 | 1420 | ena | 38025 |
External links
@ref: 3459
culture collection no.: DSM 9005, OCM 58
straininfo link
- @ref: 76535
- straininfo: 48561
literature
- topic: Metabolism
- Pubmed-ID: 7961499
- title: Potassium extrusion by the moderately halophilic and alkaliphilic methanogen methanolobus taylorii GS-16 and homeostasis of cytosolic pH.
- authors: Ni S, Boone JE, Boone DR
- journal: J Bacteriol
- DOI: 10.1128/jb.176.23.7274-7279.1994
- year: 1994
- mesh: Alkalies, Anti-Bacterial Agents/pharmacology, Archaea/growth & development/*physiology, Biological Transport/physiology, Cell Division/drug effects, Cytosol/*metabolism, Dose-Response Relationship, Drug, Homeostasis/*physiology, Hydrogen-Ion Concentration, Methane/metabolism, Potassium/*metabolism/pharmacology, Protons, Salts, Sodium/pharmacology, Valinomycin/pharmacology
- topic2: Pathogenicity
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 3459 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 9005) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-9005 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 76535 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID48561.1 | StrainInfo: A central database for resolving microbial strain identifiers |