Strain identifier
BacDive ID: 7078
Type strain: 
Species: Methanohalophilus oregonensis
Strain history: <- D.R. Boone and Y. Liu, WAL1
NCBI tax ID(s): 38024 (species)
General
@ref: 2167
BacDive-ID: 7078
DSM-Number: 5435
keywords: 16S sequence, Archaea, anaerobe, mesophilic
description: Methanohalophilus oregonensis DSM 5435 is an anaerobe, mesophilic archaeon that was isolated from subsurface sediment, saline alkaline aquifer.
NCBI tax id
- NCBI tax id: 38024
- Matching level: species
strain history
- @ref: 2167
- history: <- D.R. Boone and Y. Liu, WAL1
doi: 10.13145/bacdive7078.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Methanomicrobia
- order: Methanosarcinales
- family: Methanosarcinaceae
- genus: Methanohalophilus
- species: Methanohalophilus oregonensis
- full scientific name: Methanohalophilus oregonensis corrig. Liu et al. 1990
synonyms
@ref synonym 20215 Methanohalophilus oregonense 20215 Methanolobus oregonensis
@ref: 2167
domain: Archaea
phylum: Euryarchaeota
class: Methanomicrobia
order: Methanosarcinales
family: Methanosarcinaceae
genus: Methanolobus
species: Methanolobus oregonensis
full scientific name: Methanolobus oregonensis (Liu et al. 1990) Boone 2002
type strain: yes
Culture and growth conditions
culture medium
- @ref: 2167
- name: METHANOHALOPHILUS OREGONESE MEDIUM (DSMZ Medium 490)
- growth: yes
- link: https://mediadive.dsmz.de/medium/490
- composition: Name: METHANOLOBUS OREGONENSIS MEDIUM (DSMZ Medium 490) Composition: Na2CO3 2.5 g/l Trimethylamine-HCl 2.0 g/l Yeast extract 2.0 g/l Trypticase peptone 2.0 g/l MgCl2 x 6 H2O 1.7 g/l KCl 1.5 g/l NH4Cl 1.0 g/l 2-Mercaptoethanesulfonic acid 0.5 g/l K2HPO4 x 3 H2O 0.4 g/l Na2S x 9 H2O 0.3 g/l MgSO4 x 7 H2O 0.03 g/l Nitrilotriacetic acid 0.015 g/l NaCl 0.01 g/l MnSO4 x H2O 0.005 g/l ZnSO4 x 7 H2O 0.0018 g/l CoSO4 x 7 H2O 0.0018 g/l FeSO4 x 7 H2O 0.001 g/l CaCl2 x 2 H2O 0.001 g/l Sodium resazurin 0.0005 g/l NiCl2 x 6 H2O 0.0003 g/l AlK(SO4)2 x 12 H2O 0.0002 g/l Na2MoO4 x 2 H2O 0.0001 g/l CuSO4 x 5 H2O 0.0001 g/l H3BO3 0.0001 g/l Na2WO4 x 2 H2O 4e-06 g/l Na2SeO3 x 5 H2O 3e-06 g/l Distilled water
culture temp
- @ref: 2167
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 2167
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 2167
- sample type: subsurface sediment, saline alkaline aquifer
- geographic location: Oregon, West Alkali Lake
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | |
| #Environmental | #Terrestrial | #Sediment |
| #Condition | #Alkaline | |
| #Condition | #Saline |
Safety information
risk assessment
- @ref: 2167
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 2167
- description: Methanolobus oregonensis 16S small subunit rRNA, partial sequence
- accession: U20152
- length: 1421
- database: ena
- NCBI tax ID: 38024
External links
@ref: 2167
culture collection no.: DSM 5435, OCM 99, WAL 1
straininfo link
- @ref: 76534
- straininfo: 47929
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 2167 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 5435) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-5435 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 76534 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47929.1 | StrainInfo: A central database for resolving microbial strain identifiers |