Strain identifier
BacDive ID: 7035
Type strain: 
Species: Methanogenium sp.
Strain Designation: 8508
Strain history: <- D.R. Boone <- Y. Liu, 8508
NCBI tax ID(s): 2196 (species)
version 8.1 (current version)
General
@ref: 1715
BacDive-ID: 7035
DSM-Number: 4555
keywords: 16S sequence, Archaea, anaerobe, mesophilic
description: Methanogenium sp. 8508 is an anaerobe, mesophilic archaeon that was isolated from bean-curd digestor.
NCBI tax id
- NCBI tax id: 2196
- Matching level: species
strain history
- @ref: 1715
- history: <- D.R. Boone <- Y. Liu, 8508
doi: 10.13145/bacdive7035.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Methanomicrobia
- order: Methanomicrobiales
- family: Methanomicrobiaceae
- genus: Methanogenium
- species: Methanogenium sp.
- full scientific name: Methanogenium Romesser et al. 1981
@ref: 1715
domain: Archaea
phylum: Euryarchaeota
class: Methanomicrobia
order: Methanomicrobiales
family: Methanomicrobiaceae
genus: Methanogenium
species: Methanogenium sp.
full scientific name: Methanogenium sp.
strain designation: 8508
type strain: no
Morphology
colony morphology
- @ref: 1715
- incubation period: 2-3 days
Culture and growth conditions
culture medium
- @ref: 1715
- name: METHANOCULLEUS SP. MEDIUM (DSMZ Medium 141b)
- growth: yes
- link: https://mediadive.dsmz.de/medium/141b
- composition: Name: METHANOCULLEUS SP. MEDIUM (DSMZ Medium 141b) Composition: NaHCO3 4.89237 g/l MgCl2 x 6 H2O 3.91389 g/l Yeast extract 1.95695 g/l Trypticase peptone 1.95695 g/l Na-acetate 0.978474 g/l Na2S x 9 H2O 0.489237 g/l L-Cysteine HCl x H2O 0.489237 g/l KCl 0.332681 g/l NH4Cl 0.244618 g/l K2HPO4 0.136986 g/l MgSO4 x 7 H2O 0.0293542 g/l Nitrilotriacetic acid 0.0146771 g/l NaCl 0.00978474 g/l MnSO4 x H2O 0.00489237 g/l Fe(NH4)2(SO4)2 x 6 H2O 0.00195695 g/l CoSO4 x 7 H2O 0.00176125 g/l ZnSO4 x 7 H2O 0.00176125 g/l FeSO4 x 7 H2O 0.000978474 g/l CaCl2 x 2 H2O 0.000978474 g/l Sodium resazurin 0.000489237 g/l NiCl2 x 6 H2O 0.000293542 g/l AlK(SO4)2 x 12 H2O 0.000195695 g/l CuSO4 x 5 H2O 9.78474e-05 g/l Pyridoxine hydrochloride 9.78474e-05 g/l Na2MoO4 x 2 H2O 9.78474e-05 g/l H3BO3 9.78474e-05 g/l Nicotinic acid 4.89237e-05 g/l Riboflavin 4.89237e-05 g/l (DL)-alpha-Lipoic acid 4.89237e-05 g/l Thiamine HCl 4.89237e-05 g/l Calcium D-(+)-pantothenate 4.89237e-05 g/l p-Aminobenzoic acid 4.89237e-05 g/l Folic acid 1.95695e-05 g/l Biotin 1.95695e-05 g/l Na2WO4 x 2 H2O 3.91389e-06 g/l Na2SeO3 x 5 H2O 2.93542e-06 g/l Vitamin B12 9.78474e-07 g/l Distilled water
culture temp
- @ref: 1715
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 1715
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 1715
- sample type: bean-curd digestor
- country: USA
- origin.country: USA
- continent: North America
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Food production | #Food |
| #Host | #Plants | #Herbaceous plants (Grass,Crops) |
Sequence information
16S sequences
- @ref: 20218
- description: Enterococcus faecalis clone OCM060 16S ribosomal RNA gene, partial sequence
- accession: GU417241
- length: 458
- database: ena
- NCBI tax ID: 1351
External links
@ref: 1715
culture collection no.: DSM 4555, OCM 60
straininfo link
- @ref: 76495
- straininfo: 47855
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 1715 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 4555) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-4555 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 76495 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47855.1 | StrainInfo: A central database for resolving microbial strain identifiers |