Strain identifier
BacDive ID: 6832
Type strain: 
Species: Leuconostoc pseudomesenteroides
Strain Designation: PRO2
Strain history: <- NCDO <- T. Sozzi, PRO2
NCBI tax ID(s): 33968 (species)
version 9.1 (current version)
General
@ref: 2266
BacDive-ID: 6832
DSM-Number: 5625
keywords: genome sequence, Bacteria, human pathogen
description: Leuconostoc pseudomesenteroides PRO2 is a human pathogen that was isolated from commercial starter culture.
NCBI tax id
- NCBI tax id: 33968
- Matching level: species
strain history
- @ref: 2266
- history: <- NCDO <- T. Sozzi, PRO2
doi: 10.13145/bacdive6832.20240916.9.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Leuconostoc
- species: Leuconostoc pseudomesenteroides
- full scientific name: Leuconostoc pseudomesenteroides Farrow et al. 1989
@ref: 2266
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Leuconostocaceae
genus: Leuconostoc
species: Leuconostoc pseudomesenteroides
full scientific name: Leuconostoc pseudomesenteroides Farrow et al. 1989
strain designation: PRO2
type strain: no
Morphology
cell morphology
| @ref | gram stain | confidence | motility |
|---|---|---|---|
| 69480 | positive | 95.596 | |
| 69480 | 94.5 | no |
Culture and growth conditions
culture medium
- @ref: 2266
- name: MRS MEDIUM (DSMZ Medium 11)
- growth: yes
- link: https://mediadive.dsmz.de/medium/11
- composition: Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
culture temp
- @ref: 2266
- growth: positive
- type: growth
- temperature: 30
Physiology and metabolism
spore formation
- @ref: 69481
- spore formation: no
- confidence: 100
Isolation, sampling and environmental information
isolation
- @ref: 2266
- sample type: commercial starter culture
- country: Switzerland
- origin.country: CHE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Food production | #Starter culture |
| #Environmental | #Microbial community |
Safety information
risk assessment
- @ref: 2266
- pathogenicity human: yes, in single cases
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
- @ref: 66792
- description: Leuconostoc pseudomesenteroides strain FDAARGOS_1004
- accession: 33968.65
- assembly level: complete
- database: patric
- NCBI tax ID: 33968
GC content
- @ref: 2266
- GC-content: 38.6
Genome-based predictions
predictions
| @ref | trait | model | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 69481 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 100 | no |
| 69480 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 95.596 | no |
| 69480 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 86.983 | no |
| 69480 | spore-forming | spore-forming | Ability to form endo- or exospores | no | 89.821 | no |
| 69480 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 95.035 | no |
| 69480 | thermophilic | thermophile | Ability to grow at temperatures above or equal to 45°C | no | 96.6 | yes |
| 69480 | flagellated | motile2+ | Ability to perform flagellated movement | no | 94.5 | no |
External links
@ref: 2266
culture collection no.: DSM 5625, NCDO 2053
straininfo link
- @ref: 76297
- straininfo: 47960
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 2266 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 5625) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-5625 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 69480 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Predictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 69481 | Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch | 10.21203/rs.3.rs-2527258/v1 | Predictions based on the model GenomeNet Sporulation v. 1 | |
| 76297 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47960.1 | StrainInfo: A central database for resolving microbial strain identifiers |