Strain identifier

BacDive ID: 6769

Type strain: Yes

Species: Legionella fallonii

Strain Designation: LLAP-10

Strain history: CIP <- 2002, ATCC: strain LLAP-10 <- R.F. Benson <- T.J. Rowbotham

NCBI tax ID(s): 1212491 (strain), 96230 (species)

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General

@ref: 8370

BacDive-ID: 6769

DSM-Number: 19889

keywords: genome sequence, 16S sequence, Bacteria, microaerophile, mesophilic, motile

description: Legionella fallonii LLAP-10 is a microaerophile, mesophilic, motile bacterium of the family Legionellaceae.

NCBI tax id

NCBI tax idMatching level
96230species
1212491strain

strain history

@refhistory
8370<- CCUG <- R. F. Benson, CDC <- T. J. Rowbotham; LLAP-10
119275CIP <- 2002, ATCC: strain LLAP-10 <- R.F. Benson <- T.J. Rowbotham

doi: 10.13145/bacdive6769.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Legionellales
  • family: Legionellaceae
  • genus: Legionella
  • species: Legionella fallonii
  • full scientific name: Legionella fallonii Adeleke et al. 2001

@ref: 8370

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Legionellales

family: Legionellaceae

genus: Legionella

species: Legionella fallonii

full scientific name: Legionella fallonii Adeleke et al. 2001

strain designation: LLAP-10

type strain: yes

Morphology

cell morphology

@refmotilityconfidencegram staincell shape
69480yes91.49
6948099.997negative
119275yesnegativerod-shaped

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
8370BCYE-AGAR (DSMZ Medium 585)yeshttps://mediadive.dsmz.de/medium/585Name: BCYE AGAR (DSMZ Medium 585) Composition: OXOID Legionella CYE-Agar base
39698MEDIUM 23 - for Afipia and LegionellayesDistilled water make up to (1000.000 ml);Legionella agar (37.000 g);Legionella - enrichment mixture (10.000 ml)
119275CIP Medium 23yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=23

culture temp

@refgrowthtypetemperaturerange
8370positivegrowth30mesophilic
39698positivegrowth30mesophilic

Physiology and metabolism

oxygen tolerance

@refoxygen tolerance
8370microaerophile
56068aerobe

spore formation

@refspore formationconfidence
69481no100
69480no99.982

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837717634D-glucose+builds acid from
6837715824D-fructose+builds acid from
6837717306maltose+builds acid from
6837718257ornithine-degradation
6837716199urea-hydrolysis
6837727897tryptophan-energy source

metabolite production

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 68377
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: -

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase-3.2.1.52
68382beta-glucosidase-3.2.1.21
68382alpha-glucosidase-3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase-3.2.1.23
68382alpha-galactosidase-3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase-3.4.11.3
68382valine arylamidase+
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
68377tryptophan deaminase-4.1.99.1
68377beta-galactosidase-3.2.1.23
68377urease-3.5.1.5
68377ornithine decarboxylase-4.1.1.17
119275oxidase-
119275catalase+1.11.1.6

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
119275-+++-++---++--------

API NH

@refPENGLUFRUMALSACODCURELIPPALbeta GALProAGGTIND
8370++++---+--+--
8370-++++---+--+-

Isolation, sampling and environmental information

isolation

@refcountryorigin.countrycontinentsample typeisolation date
8370United KingdomGBREurope
56068United KingdomGBREurope
119275Environment, Ship air-conditioning system1994

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
83701Risk group (German classification)
1192752Risk group (French classification)

Sequence information

16S sequences

  • @ref: 20218
  • description: Legionella fallonii strain MDC1760 16S ribosomal RNA gene, partial sequence
  • accession: JF720412
  • length: 524
  • database: ena
  • NCBI tax ID: 96230

Genome sequences

@refdescriptionaccessionassembly leveldatabaseNCBI tax ID
66792Legionella fallonii LLAP-10GCA_000953135completencbi1212491
66792Legionella fallonii LLAP-101212491.4plasmidpatric1212491
66792Legionella fallonii LLAP-101212491.5plasmidpatric1212491
66792Legionella fallonii LLAP-10 strain ATCC7009921212491.3completepatric1212491
66792Legionella fallonii LLAP-10 ATCC7009922654588015completeimg1212491

Genome-based predictions

predictions

traitpredictionconfidencetraining_data
spore-formingno100no
motileyes76.595no
flagellatedno72.185no
gram-positiveno98.121no
anaerobicno98.169no
aerobicno89.424no
halophileno92.955no
spore-formingno92.77no
glucose-utilyes71.466no
thermophileno98.974no
glucose-fermentno86.167no

External links

@ref: 8370

culture collection no.: DSM 19889, ATCC 700992, CCUG 43887, CIP 107645

straininfo link

  • @ref: 76239
  • straininfo: 44243

literature

  • topic: Phylogeny
  • Pubmed-ID: 11411684
  • title: Legionella drozanskii sp. nov., Legionella rowbothamii sp. nov. and Legionella fallonii sp. nov.: three unusual new Legionella species.
  • authors: Adeleke AA, Fields BS, Benson RF, Daneshvar MI, Pruckler JM, Ratcliff RM, Harrison TG, Weyant RS, Birtles RJ, Raoult D, Halablab MA
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/00207713-51-3-1151
  • year: 2001
  • mesh: Acanthamoeba/isolation & purification/*microbiology, Animals, DNA, Ribosomal/genetics, Genotype, Legionella/*classification/genetics/isolation & purification, Molecular Sequence Data, *Phylogeny, Poland, RNA, Ribosomal, 16S/genetics, Soil
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
8370Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 19889)https://www.dsmz.de/collection/catalogue/details/culture/DSM-19889
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
39698Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/5103
56068Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 43887)https://www.ccug.se/strain?id=43887
66792Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesAutomatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
66794Antje Chang, Lisa Jeske, Sandra Ulbrich, Julia Hofmann, Julia Koblitz, Ida Schomburg, Meina Neumann-Schaal, Dieter Jahn, Dietmar Schomburg10.1093/nar/gkaa1025BRENDA, the ELIXIR core data resource in 2021: new developments and updatesNucleic Acids Res. 49: D498-D508 202033211880
68377Automatically annotated from API NH
68382Automatically annotated from API zym
69480Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmannhttps://diaspora-project.de/progress.html#genomesPredictions based on genome sequence made in the Diaspora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information)
69481Xiao-Yin To, René Mreches, Martin Binder, Alice C. McHardy, Philipp C. Münch10.21203/rs.3.rs-2527258/v1Predictions based on the model GenomeNet Sporulation v. 1
76239Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID44243.1StrainInfo: A central database for resolving microbial strain identifiers
119275Curators of the CIPCollection of Institut Pasteur (CIP 107645)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20107645