Strain identifier
BacDive ID: 6647
Type strain: 
Species: Ligilactobacillus apodemi
Strain Designation: ASB2
Strain history: <- R. Osawa; ASB2
NCBI tax ID(s): 307126 (species)
General
@ref: 6538
BacDive-ID: 6647
DSM-Number: 16635
keywords: Bacteria, anaerobe, mesophilic
description: Ligilactobacillus apodemi ASB2 is an anaerobe, mesophilic bacterium that was isolated from feces, wild Japanese wood mouse.
NCBI tax id
- NCBI tax id: 307126
- Matching level: species
strain history
- @ref: 6538
- history: <- R. Osawa; ASB2
doi: 10.13145/bacdive6647.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Lactobacillales
- family: Lactobacillaceae
- genus: Ligilactobacillus
- species: Ligilactobacillus apodemi
- full scientific name: Ligilactobacillus apodemi (Osawa et al. 2006) Zheng et al. 2020
synonyms
- @ref: 20215
- synonym: Lactobacillus apodemi
@ref: 6538
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Lactobacillales
family: Lactobacillaceae
genus: Ligilactobacillus
species: Ligilactobacillus apodemi
full scientific name: Ligilactobacillus apodemi (Osawa et al. 2006) Zheng et al. 2020
strain designation: ASB2
type strain: no
Culture and growth conditions
culture medium
- @ref: 6538
- name: MRS MEDIUM (DSMZ Medium 11)
- growth: yes
- link: https://mediadive.dsmz.de/medium/11
- composition: Name: MRS MEDIUM (DSMZ Medium 11) Composition: Glucose 20.0 g/l Casein peptone 10.0 g/l Meat extract 10.0 g/l Na-acetate 5.0 g/l Yeast extract 5.0 g/l (NH4)3 citrate 2.0 g/l K2HPO4 2.0 g/l Tween 80 1.0 g/l MgSO4 x 7 H2O 0.2 g/l MnSO4 x H2O 0.05 g/l Distilled water
culture temp
- @ref: 6538
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
| @ref | oxygen tolerance |
|---|---|
| 6538 | anaerobe |
| 6538 | microaerophile |
Isolation, sampling and environmental information
isolation
- @ref: 6538
- sample type: feces, wild Japanese wood mouse
- geographic location: Kyotanabe
- country: Japan
- origin.country: JPN
- continent: Asia
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Mammals | #Muridae (Mouse/Rat) |
| #Host Body Product | #Gastrointestinal tract | #Feces (Stool) |
Safety information
risk assessment
- @ref: 6538
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
External links
@ref: 6538
culture collection no.: DSM 16635
straininfo link
- @ref: 76121
- straininfo: 297679
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 6538 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 16635) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-16635 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 76121 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID297679.1 | StrainInfo: A central database for resolving microbial strain identifiers |