Strain identifier

BacDive ID: 648

Type strain: No

Species: Heyndrickxia coagulans

Strain Designation: 784

Strain history: CIP <- 1952, R.E. Gordon, New Jersey, Agri. Exper. Stat., New Brunswick, USA: strain 784 <- 1941, C.H. Werkman, Bacillus dextrolacticus

NCBI tax ID(s): 1398 (species)

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General

@ref: 1039

BacDive-ID: 648

DSM-Number: 2311

keywords: Bacteria, facultative anaerobe, mesophilic, Gram-positive, motile, rod-shaped, lactate production, human pathogen

description: Heyndrickxia coagulans 784 is a facultative anaerobe, mesophilic, Gram-positive human pathogen that produces lactate.

NCBI tax id

  • NCBI tax id: 1398
  • Matching level: species

strain history

@refhistory
1039<- NCIB <- ATCC <- N.R. Smith, 784 <- C. Werkman (Bacillus dextrolacticus)
118319CIP <- 1952, R.E. Gordon, New Jersey, Agri. Exper. Stat., New Brunswick, USA: strain 784 <- 1941, C.H. Werkman, Bacillus dextrolacticus

doi: 10.13145/bacdive648.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Heyndrickxia
  • species: Heyndrickxia coagulans
  • full scientific name: Heyndrickxia coagulans (Hammer 1915) Narsing Rao et al. 2023

  • synonyms

    @refsynonym
    20215Bacillus coagulans
    20215Weizmannia coagulans

@ref: 1039

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Weizmannia

species: Weizmannia coagulans

full scientific name: Weizmannia coagulans (Hammer 1915) Gupta et al. 2020

strain designation: 784

type strain: no

Morphology

cell morphology

  • @ref: 118319
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: yes

colony morphology

  • @ref: 118319

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
35264MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
1039NUTRIENT AGAR (DSMZ Medium 1)yesName: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled waterhttps://mediadive.dsmz.de/medium/1
118319CIP Medium 72yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=72
118319CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
1039positivegrowth37mesophilic
35264positivegrowth37mesophilic
118319positivegrowth22-55
118319nogrowth10psychrophilic

culture pH

  • @ref: 118319
  • ability: positive
  • type: growth
  • pH: 6

Physiology and metabolism

oxygen tolerance

  • @ref: 118319
  • oxygen tolerance: facultative anaerobe

compound production

@refcompound
1039L(+) lactic acid
1039D(-) lactic acid

halophily

@refsaltgrowthtested relationconcentration
118319NaClpositivegrowth0-6 %
118319NaClnogrowth8 %
118319NaClnogrowth10 %

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6837124265gluconate+builds acid from
6837118403L-arabitol-builds acid from
6837118333D-arabitol+builds acid from
6837128847D-fucose-builds acid from
6837116443D-tagatose-builds acid from
6837162318D-lyxose-builds acid from
6837132528turanose+builds acid from
6837128087glycogen-builds acid from
683716731melezitose-builds acid from
6837115443inulin-builds acid from
6837127082trehalose+builds acid from
6837128053melibiose+builds acid from
6837117306maltose+builds acid from
6837117057cellobiose+builds acid from
6837117814salicin+builds acid from
683714853esculin+builds acid from
6837118305arbutin+builds acid from
6837159640N-acetylglucosamine+builds acid from
68371320061methyl alpha-D-glucopyranoside+builds acid from
6837117924D-sorbitol+builds acid from
6837116899D-mannitol-builds acid from
6837116813galactitol-builds acid from
6837162345L-rhamnose+builds acid from
6837117266L-sorbose-builds acid from
6837116024D-mannose+builds acid from
6837115824D-fructose+builds acid from
6837117634D-glucose+builds acid from
6837112936D-galactose+builds acid from
6837174863methyl beta-D-xylopyranoside-builds acid from
6837115963ribitol-builds acid from
6837165328L-xylose-builds acid from
6837116988D-ribose+builds acid from
6837130849L-arabinose+builds acid from
6837117754glycerol+builds acid from
11831916947citrate-carbon source
1183194853esculin+hydrolysis
118319606565hippurate+hydrolysis
11831917632nitrate-reduction
11831916301nitrite-reduction
11831917632nitrate+respiration

metabolite production

  • @ref: 118319
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

@refChebi-IDmetabolitevoges-proskauer-testmethylred-test
11831915688acetoin+
11831917234glucose+

enzymes

@refvalueactivityec
68382alpha-fucosidase-3.2.1.51
68382alpha-mannosidase-3.2.1.24
68382N-acetyl-beta-glucosaminidase+3.2.1.52
68382beta-glucosidase+3.2.1.21
68382alpha-glucosidase+3.2.1.20
68382beta-glucuronidase-3.2.1.31
68382beta-galactosidase+3.2.1.23
68382alpha-galactosidase+3.2.1.22
68382naphthol-AS-BI-phosphohydrolase+
68382acid phosphatase+3.1.3.2
68382alpha-chymotrypsin-3.4.21.1
68382trypsin-3.4.21.4
68382cystine arylamidase+3.4.11.3
68382valine arylamidase-
68382leucine arylamidase+3.4.11.1
68382lipase (C 14)-
68382esterase lipase (C 8)+
68382esterase (C 4)+
68382alkaline phosphatase+3.1.3.1
118319oxidase-
118319beta-galactosidase+3.2.1.23
118319alcohol dehydrogenase-1.1.1.1
118319gelatinase-
118319amylase-
118319DNase-
118319caseinase+3.4.21.50
118319catalase+1.11.1.6
118319tween esterase+
118319gamma-glutamyltransferase-2.3.2.2
118319lecithinase+
118319lipase-
118319lysine decarboxylase-4.1.1.18
118319ornithine decarboxylase-4.1.1.17
118319urease-3.5.1.5

API zym

@refControlAlkaline phosphataseEsteraseEsterase LipaseLipaseLeucine arylamidaseValine arylamidaseCystine arylamidaseTrypsinalpha- ChymotrypsinAcid phosphataseNaphthol-AS-BI-phosphohydrolasealpha- Galactosidasebeta- Galactosidasebeta- Glucuronidasealpha- Glucosidasebeta- GlucosidaseN-acetyl-beta- glucosaminidasealpha- Mannosidasealpha- Fucosidase
118319-+++-+-+--++++-+++--

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
118319++/-+/-+++/----++++-+-+/--++/-+++/-++++++/-++/-+--+/-+/--+/-+/-+---+/-+-++/-+/-

API biotype100

@refGLUFRUGALTREMNESBEMELSACRAFMTEMALLACLTEMbGaMaGaCELGENMbGuESCRIBARAXYLPLERHAFUCMLZDARLLARLXLTDULTAGGLYINOMANMTLTURSORADOHBGLYXERYMDG3MDGSATMUCLTATDTATMTATDMLTLMLTCATETATETTECITGRTGAT2KG5KGTRYNAGGNTPACPATpOBEQATGTEmOBEBATPPATCMTTGEBETPCEABTHINLATCAPCYTHISSUCFUMGREGYTAVTETNTTNGLNITA3OBUAPTGTTPRODALALALASERMNTPROPTYR2KT
118319+++++-++-++-+++--++---+++------++-++-----+--------------+--++---+----------+----------+-+----------

Safety information

risk assessment

@refpathogenicity humanbiosafety levelbiosafety level comment
1039yes, in single cases1Risk group (German classification)
1183191Risk group (French classification)

Sequence information

GC content

  • @ref: 1039
  • GC-content: 45.3

External links

@ref: 1039

culture collection no.: DSM 2311, ATCC 10545, CCM 1082, NCIB 8041, NRS 784, CIP 52.63, NCDO 725, NCIMB 8041

straininfo link

  • @ref: 70323
  • straininfo: 35242

Reference

@idauthorscataloguedoi/urltitle
1039Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2311)https://www.dsmz.de/collection/catalogue/details/culture/DSM-2311
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
35264Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/13245
68371Automatically annotated from API 50CH acid
68382Automatically annotated from API zym
70323Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID35242.1StrainInfo: A central database for resolving microbial strain identifiers
118319Curators of the CIPCollection of Institut Pasteur (CIP 52.63)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2052.63