Strain identifier
BacDive ID: 6331
Type strain: 
Species: Kofleria flava
Strain Designation: Pl vt1
Strain history: DSM 14601 <-- H. Reichenbach Pl vt1.
NCBI tax ID(s): 694315 (species)
version 9 (current version)
General
@ref: 5403
BacDive-ID: 6331
DSM-Number: 14601
keywords: 16S sequence, Bacteria
description: Kofleria flava Pl vt1 is a bacterium that was isolated from soil with decaying plant material.
NCBI tax id
- NCBI tax id: 694315
- Matching level: species
strain history
| @ref | history |
|---|---|
| 5403 | <- H. Reichenbach; Plvt1 |
| 67770 | DSM 14601 <-- H. Reichenbach Pl vt1. |
doi: 10.13145/bacdive6331.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Myxococcales
- family: Kofleriaceae
- genus: Kofleria
- species: Kofleria flava
- full scientific name: Kofleria flava (ex Kofler 1913) Reichenbach 2007
@ref: 5403
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Myxococcales
family: Kofleriaceae
genus: Kofleria
species: Kofleria flava
full scientific name: Kofleria flava (ex Kofler 1913) Reichenbach 2007
strain designation: Pl vt1
type strain: yes
Morphology
multimedia
| @ref | multimedia content | caption | intellectual property rights |
|---|---|---|---|
| 18281 | /dsmz_profile/Pictures_DSMZ_Web/Polyangium_velatum/Pl_vt1 | Pl vt1; DSM 14601 | Helmholtz-Zentrum für Infektionsforschung GmbH |
| 5403 | https://www.dsmz.de/microorganisms/photos/DSM_14601.jpg | vegetative cells | © Leibniz-Institut DSMZ |
| 66793 | EM_DSM_14601_1.jpg | electron microscopic image | © HZI/Manfred Rohde |
| 66793 | EM_DSM_14601_2.jpg | electron microscopic image | © HZI/Manfred Rohde |
| 66793 | EM_DSM_14601_3.jpg | electron microscopic image | © HZI/Manfred Rohde |
| 66793 | EM_DSM_14601_4.jpg | electron microscopic image | © HZI/Manfred Rohde |
| 66793 | EM_DSM_14601_5.jpg | electron microscopic image | © HZI/Manfred Rohde |
Culture and growth conditions
culture medium
- @ref: 5403
- name: VY/2 AGAR (DSMZ Medium 9)
- growth: yes
- link: https://mediadive.dsmz.de/medium/9
- composition: Name: VY/2 AGAR (DSMZ Medium 9) Composition: Agar 15.0 g/l Baker's yeast 5.0 g/l CaCl2 x 2 H2O 1.36 g/l Vitamin B12 0.0005 g/l Distilled water
culture temp
| @ref | growth | type | temperature |
|---|---|---|---|
| 5403 | positive | growth | 30 |
| 67770 | positive | growth | 30 |
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 5403 | soil with decaying plant material | Pennsylvania | USA | USA | North America |
| 67770 | Soil with plant residues | PA | USA | USA | North America |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Soil |
| #Host | #Plants | #Decomposing plant |
taxonmaps
- @ref: 69479
- File name: preview.99_135634.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_15848;96_29919;97_56685;98_90493;99_135634&stattab=map
- Last taxonomy: Kofleria flava subclade
- 16S sequence: AJ233944
- Sequence Identity:
- Total samples: 72
- soil counts: 62
- aquatic counts: 8
- animal counts: 2
Safety information
risk assessment
- @ref: 5403
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 5403
- description: Kofleria flava 16S rRNA gene, strain Pl vt1
- accession: AJ233944
- length: 1498
- database: nuccore
- NCBI tax ID: 694315
External links
@ref: 5403
culture collection no.: DSM 14601, CIP 109120, JCM 12632
straininfo link
- @ref: 75805
- straininfo: 297595
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 5403 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 14601) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-14601 | |||
| 18281 | Reichenbach, H. | Collection description and documentation of myxobacteria by H. Reichenbach, HZI (formerly GBF); Collection curr. located at the DSMZ | ||||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 66793 | Mukherjee et al. | 10.1038/nbt.3886 | GEBA: 1,003 reference genomes of bacterial and archaeal isolates expand coverage of the tree of life | 35: 676-683 2017 | 28604660 | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |||
| 75805 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID297595.1 | StrainInfo: A central database for resolving microbial strain identifiers |