Strain identifier
BacDive ID: 633
Type strain: 
Species: Bacillus cereus
Strain Designation: SU160
Strain history: <- M. Salkinoja-Salonen, Helsinki Univ., Dept. Appl. Chem. and Microbiol., Finland <- B. Svensson, Swedish Dairy Association, Lund, Sweden; SU160
NCBI tax ID(s): 1396 (species)
version 9.3 (current version)
General
@ref: 16448
BacDive-ID: 633
DSM-Number: 22650
keywords: genome sequence, Bacteria, mesophilic
description: Bacillus cereus SU160 is a mesophilic bacterium that was isolated from dairy plant.
NCBI tax id
- NCBI tax id: 1396
- Matching level: species
strain history
- @ref: 16448
- history: <- M. Salkinoja-Salonen, Helsinki Univ., Dept. Appl. Chem. and Microbiol., Finland <- B. Svensson, Swedish Dairy Association, Lund, Sweden; SU160
doi: 10.13145/bacdive633.20250331.9.3
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacillota
- domain: Bacteria
- phylum: Bacillota
- class: Bacilli
- order: Caryophanales
- family: Bacillaceae
- genus: Bacillus
- species: Bacillus cereus
- full scientific name: Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)
@ref: 16448
domain: Bacteria
phylum: Firmicutes
class: Bacilli
order: Bacillales
family: Bacillaceae
genus: Bacillus
species: Bacillus cereus
full scientific name: Bacillus cereus Frankland and Frankland 1887
strain designation: SU160
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 16448 | NUTRIENT AGAR (DSMZ Medium 1) | yes | https://mediadive.dsmz.de/medium/1 | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water |
| 16448 | CASO AGAR (MERCK 105458) (DSMZ Medium 220) | yes | https://mediadive.dsmz.de/medium/220 | Name: CASO AGAR (Merck 105458) (DSMZ Medium 220) Composition: Agar 15.0 g/l Casein peptone 15.0 g/l NaCl 5.0 g/l Soy peptone 5.0 g/l Distilled water |
culture temp
- @ref: 16448
- growth: positive
- type: growth
- temperature: 28
Physiology and metabolism
oxygen tolerance
- @ref: 125439
- oxygen tolerance: anaerobe
- confidence: 94.7
Isolation, sampling and environmental information
isolation
- @ref: 16448
- sample type: dairy plant
- country: Sweden
- origin.country: SWE
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Engineered | #Food production | #Dairy product |
| #Engineered | #Industrial | #Plant (Factory) |
Safety information
risk assessment
- @ref: 16448
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
Sequence information
Genome sequences
- @ref: 66792
- description: Bacillus cereus DSM 22650
- accession: GCA_918180185
- assembly level: contig
- database: ncbi
- NCBI tax ID: 1396
Genome-based predictions
predictions
| @ref | model | trait | description | prediction | confidence | training_data |
|---|---|---|---|---|---|---|
| 125438 | gram-positive | gram-positive | Positive reaction to Gram-staining | yes | 74.972 | no |
| 125438 | anaerobic | anaerobic | Ability to grow under anoxygenic conditions (including facultative anaerobes) | no | 92.046 | no |
| 125438 | aerobic | aerobic | Ability to grow under oxygenic conditions (including facultative aerobes) | no | 57.592 | no |
| 125438 | spore-forming | spore-forming | Ability to form endo- or exospores | yes | 83.179 | no |
| 125438 | thermophile | thermophilic | Ability to grow at temperatures above or equal to 45°C | no | 94.51 | yes |
| 125438 | motile2+ | flagellated | Ability to perform flagellated movement | yes | 85.431 | no |
| 125439 | BacteriaNet | spore_formation | Ability to form endo- or exospores | yes | 70.5 | |
| 125439 | BacteriaNet | motility | Ability to perform movement | yes | 64.4 | |
| 125439 | BacteriaNet | gram_stain | Reaction to gram-staining | variable | 70.5 | |
| 125439 | BacteriaNet | oxygen_tolerance | Oxygenic conditions needed for growth | anaerobe | 94.7 |
External links
@ref: 16448
culture collection no.: DSM 22650
straininfo link
- @ref: 70308
- straininfo: 403683
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 16448 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22650) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-22650 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |
| 70308 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID403683.1 | StrainInfo: A central database for resolving microbial strain identifiers | |
| 125438 | Julia Koblitz, Lorenz Christian Reimer, Rüdiger Pukall, Jörg Overmann | 10.1101/2024.08.12.607695 | Predicting bacterial phenotypic traits through improved machine learning using high-quality, curated datasets | |
| 125439 | Philipp Münch, René Mreches, Martin Binder, Hüseyin Anil Gündüz, Xiao-Yin To, Alice McHardy | https://github.com/GenomeNet/deepG | deepG: Deep Learning for Genome Sequence Data. R package version 0.3.1 |