Strain identifier

BacDive ID: 610

Type strain: No

Species: Bacillus cereus

Strain history: CIP <- 1970, DSM <- J.C.G. Ottow <- 1969, B. Delaporte, Inst. Pasteur, Paris, France <- C.F. Robinow, Bacillus medusa

NCBI tax ID(s): 1396 (species)

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General

@ref: 319

BacDive-ID: 610

DSM-Number: 609

keywords: 16S sequence, Bacteria, facultative anaerobe, spore-forming, mesophilic, Gram-positive, rod-shaped

description: Bacillus cereus DSM 609 is a facultative anaerobe, spore-forming, mesophilic bacterium that was isolated from cow dung.

NCBI tax id

  • NCBI tax id: 1396
  • Matching level: species

strain history

@refhistory
319<- J.C.G. Ottow <- B. Delaporte (Bacillus medusa) <- C.F. Robinow
117249CIP <- 1970, DSM <- J.C.G. Ottow <- 1969, B. Delaporte, Inst. Pasteur, Paris, France <- C.F. Robinow, Bacillus medusa

doi: 10.13145/bacdive610.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/bacillota
  • domain: Bacteria
  • phylum: Bacillota
  • class: Bacilli
  • order: Caryophanales
  • family: Bacillaceae
  • genus: Bacillus
  • species: Bacillus cereus
  • full scientific name: Bacillus cereus Frankland and Frankland 1887 (Approved Lists 1980)

@ref: 319

domain: Bacteria

phylum: Firmicutes

class: Bacilli

order: Bacillales

family: Bacillaceae

genus: Bacillus

species: Bacillus cereus

full scientific name: Bacillus cereus Frankland and Frankland 1887

type strain: no

Morphology

cell morphology

  • @ref: 117249
  • gram stain: positive
  • cell shape: rod-shaped
  • motility: no

Culture and growth conditions

culture medium

@refnamegrowthcompositionlink
38058MEDIUM 3 - Columbia agaryesColumbia agar (39.000 g);distilled water (1000.000 ml)
319NUTRIENT AGAR (DSMZ Medium 1)yesName: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled waterhttps://mediadive.dsmz.de/medium/1
117249CIP Medium 3yeshttps://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=3

culture temp

@refgrowthtypetemperaturerange
319positivegrowth30mesophilic
38058positivegrowth30mesophilic
117249positivegrowth30-37mesophilic
117249nogrowth10psychrophilic
117249nogrowth45thermophilic
117249nogrowth55thermophilic

culture pH

  • @ref: 117249
  • ability: positive
  • type: growth
  • pH: 6

Physiology and metabolism

oxygen tolerance

  • @ref: 117249
  • oxygen tolerance: facultative anaerobe

spore formation

  • @ref: 117249
  • spore formation: yes

metabolite utilization

@refmetaboliteutilization activitykind of utilization testedChebi-ID
68371Potassium 5-ketogluconate-builds acid from
68371Potassium 2-ketogluconate-builds acid from
68371gluconate-builds acid from24265
68371L-arabitol-builds acid from18403
68371D-arabitol-builds acid from18333
68371L-fucose-builds acid from18287
68371D-fucose-builds acid from28847
68371D-tagatose-builds acid from16443
68371D-lyxose-builds acid from62318
68371turanose-builds acid from32528
68371gentiobiose-builds acid from28066
68371xylitol-builds acid from17151
68371glycogen-builds acid from28087
68371starch-builds acid from28017
68371raffinose-builds acid from16634
68371melezitose-builds acid from6731
68371inulin-builds acid from15443
68371sucrose-builds acid from17992
68371melibiose-builds acid from28053
68371lactose-builds acid from17716
68371cellobiose-builds acid from17057
68371esculin-builds acid from4853
68371arbutin-builds acid from18305
68371amygdalin-builds acid from27613
68371methyl alpha-D-glucopyranoside-builds acid from320061
68371methyl alpha-D-mannoside-builds acid from43943
68371D-sorbitol-builds acid from17924
68371D-mannitol-builds acid from16899
68371myo-inositol-builds acid from17268
68371galactitol-builds acid from16813
68371L-rhamnose-builds acid from62345
68371L-sorbose-builds acid from17266
68371D-mannose-builds acid from16024
68371D-fructose-builds acid from15824
68371methyl beta-D-xylopyranoside-builds acid from74863
68371ribitol-builds acid from15963
68371L-xylose-builds acid from65328
68371D-xylose-builds acid from65327
68371L-arabinose-builds acid from30849
68371D-arabinose-builds acid from17108
68371erythritol-builds acid from17113
117249citrate-carbon source16947
117249nitrate-reduction17632
117249nitrite-reduction16301
117249nitrate+respiration17632

metabolite production

  • @ref: 117249
  • Chebi-ID: 35581
  • metabolite: indole
  • production: no

metabolite tests

  • @ref: 117249
  • Chebi-ID: 15688
  • metabolite: acetoin
  • voges-proskauer-test: +

enzymes

@refvalueactivityec
117249oxidase+
117249alcohol dehydrogenase-1.1.1.1
117249gelatinase+
117249amylase+
117249DNase-
117249caseinase+3.4.21.50
117249catalase+1.11.1.6
117249lecithinase+
117249lysine decarboxylase-4.1.1.18
117249ornithine decarboxylase-4.1.1.17
117249urease+3.5.1.5

API 50CHac

@refGLYERYDARALARARIBDXYLLXYLADOMDXGALGLUFRUMNESBERHADULINOMANSORMDMMDGNAGAMYARBESCSALCELMALLACMELSACTREINUMLZRAFAMDGLYGXLTGENTURLYXTAGDFUCLFUCDARLLARLGNT2KG5KG
117249+/----+/-----+/-+/-----------+/----+/--+/----+/------------------

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
319cow dungCambridgeUnited KingdomGBREurope
117249Animal, Cow, dungUnited KingdomGBREurope

isolation source categories

Cat1Cat2Cat3
#Host#Mammals#Bovinae (Cow, Cattle)
#Host Body Product#Gastrointestinal tract#Feces (Stool)

taxonmaps

  • @ref: 69479
  • File name: preview.99_26.png
  • url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_3;96_21;97_22;98_25;99_26&stattab=map
  • Last taxonomy: Bacillus
  • 16S sequence: AY795568
  • Sequence Identity:
  • Total samples: 4969
  • soil counts: 1920
  • aquatic counts: 446
  • animal counts: 1524
  • plant counts: 1079

Safety information

risk assessment

@refbiosafety levelbiosafety level comment
3192Risk group (German classification)
1172491Risk group (French classification)

Sequence information

16S sequences

@refdescriptionaccessionlengthdatabaseNCBI tax ID
20218Bacillus cereus strain ATCC25621 16S-23S ribosomal RNA intergenic spacer, partial sequenceAF267907144ena1396
20218Bacillus cereus strain ATCC 25621 16S ribosomal RNA gene, partial sequenceAY7955681548ena1396

External links

@ref: 319

culture collection no.: DSM 609, ATCC 25621, NCIB 10437, CIP 70.1, NCIMB 10437

straininfo link

  • @ref: 70287
  • straininfo: 1103

Reference

@idauthorscataloguedoi/urltitlejournalpubmed
319Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 609)https://www.dsmz.de/collection/catalogue/details/culture/DSM-609
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
20218Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P.10.1016/j.syapm.2013.11.002StrainInfo introduces electronic passports for microorganisms.Syst Appl Microbiol. 37: 42-50 201424321274
38058Curators of the CIPhttps://brclims.pasteur.fr/brcWeb/souche/detail/1/10469
68371Automatically annotated from API 50CH acid
69479João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich.https://microbeatlas.org/MicrobeAtlas 1.0 beta
70287Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID1103.1StrainInfo: A central database for resolving microbial strain identifiers
117249Curators of the CIPCollection of Institut Pasteur (CIP 70.1)https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%2070.1