Strain identifier
BacDive ID: 6003
Type strain: 
Species: Cobetia marina
Strain Designation: C-1
Variant: Isotype of BacDive ID 6004
Strain history: <- ATCC <- A. Rosenberg, C-1
NCBI tax ID(s): 28258 (species)
General
@ref: 1899
BacDive-ID: 6003
DSM-Number: 5160
keywords: 16S sequence, Bacteria
description: Cobetia marina C-1 is a bacterium of the family Halomonadaceae.
NCBI tax id
- NCBI tax id: 28258
- Matching level: species
strain history
- @ref: 1899
- history: <- ATCC <- A. Rosenberg, C-1
doi: 10.13145/bacdive6003.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Oceanospirillales
- family: Halomonadaceae
- genus: Cobetia
- species: Cobetia marina
- full scientific name: Cobetia marina (Cobet et al. 1970) Arahal et al. 2002
synonyms
@ref synonym 20215 Pseudomonas marina 20215 Halomonas marina 20215 Arthrobacter marinus 20215 Halomonas halodurans 20215 Deleya marina
@ref: 1899
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Oceanospirillales
family: Halomonadaceae
genus: Cobetia
species: Cobetia marina
full scientific name: Cobetia marina (Cobet et al. 1970) Arahal et al. 2002 emend. Romanenko et al. 2013
strain designation: C-1
variant: Isotype of BacDive ID 6004
type strain: no
Culture and growth conditions
culture medium
- @ref: 1899
- name: MEDIUM 514 PLUS ADDITIONAL SALT (DSMZ Medium 514b)
- growth: yes
- link: https://mediadive.dsmz.de/medium/514b
- composition: Name: MEDIUM 514 plus additional salt (DSMZ Medium 514b; with strain-specific modifications) Composition: NaCl 60.0 g/l Agar 17.5 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water
culture temp
- @ref: 1899
- growth: positive
- type: growth
- temperature: 26
Isolation, sampling and environmental information
isolation
- @ref: 1899
- geographic location: Great Bay Estuary, Durham
- country: USA
- origin.country: USA
- continent: North America
Safety information
risk assessment
- @ref: 1899
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 1899 | Halomonas halodurans partial 16S rRNA gene, strain DSM 5160 | FN257743 | 1447 | nuccore | 28258 |
| 1899 | Cobetia marina strain C-1 16S ribosomal RNA, partial sequence | NR_025928 | 1474 | nuccore | 28258 |
External links
@ref: 1899
culture collection no.: DSM 5160, ATCC 29686
literature
- topic: Phylogeny
- Pubmed-ID: 8542554
- title: Description of two new species of Halomonas: Halomonas israelensis sp.nov. and Halomonas canadensis sp.nov.
- authors: Huval JH, Latta R, Wallace R, Kushner DJ, Vreeland RH
- journal: Can J Microbiol
- DOI: 10.1139/m95-156
- year: 1995
- mesh: Culture Media/chemistry, Gram-Negative Aerobic Bacteria/*classification/enzymology/genetics/*growth & development, Microbial Sensitivity Tests, Sodium Chloride, Species Specificity
- topic2: Cultivation
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 1899 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 5160) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-5160 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ |