Strain identifier
BacDive ID: 5963
Type strain: 
Species: Natrialba aegyptia
Strain Designation: 40, 48-98
Strain history: DSM 13077 <-- B. H. A. Rehm <-- F. F. Hezayen 40.
NCBI tax ID(s): 1227491 (strain), 129789 (species)
version 8.1 (current version)
General
@ref: 4899
BacDive-ID: 5963
DSM-Number: 13077
keywords: genome sequence, 16S sequence, Archaea, mesophilic, amino acid production
description: Natrialba aegyptia 40 is a mesophilic archaeon that produces amino acids and was isolated from hypersaline soil.
NCBI tax id
| NCBI tax id | Matching level |
|---|---|
| 129789 | species |
| 1227491 | strain |
strain history
| @ref | history |
|---|---|
| 4899 | <- B. H. A. Rehm; 40 <- F. F. Hezayen |
| 67770 | DSM 13077 <-- B. H. A. Rehm <-- F. F. Hezayen 40. |
doi: 10.13145/bacdive5963.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/methanobacteriota
- domain: Archaea
- phylum: Methanobacteriota
- class: Halobacteria
- order: Natrialbales
- family: Natrialbaceae
- genus: Natrialba
- species: Natrialba aegyptia
- full scientific name: Natrialba aegyptia corrig. Hezayen et al. 2001
synonyms
- @ref: 20215
- synonym: Natrialba aegyptiaca
@ref: 4899
domain: Archaea
phylum: Euryarchaeota
class: Halobacteria
order: Halobacteriales
family: Natrialbaceae
genus: Natrialba
species: Natrialba aegyptia
full scientific name: Natrialba aegyptia Hezayen et al. 2001
strain designation: 40, 48-98
type strain: yes
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 4899 | HALOBACTERIA MEDIUM (DSMZ Medium 372) | yes | https://mediadive.dsmz.de/medium/372 | Name: HALOBACTERIA MEDIUM (DSMZ Medium 372) Composition: NaCl 200.0 g/l MgSO4 x 7 H2O 20.0 g/l Agar 20.0 g/l Yeast extract 5.0 g/l Casamino acids 5.0 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l Na glutamate 1.0 g/l FeCl2 x 4 H2O 0.036 g/l MnCl2 x 4 H2O 0.00036 g/l Distilled water |
| 4899 | HALOBACTERIUM MEDIUM (DSMZ Medium 97) | yes | https://mediadive.dsmz.de/medium/97 | Name: HALOBACTERIUM MEDIUM (DSMZ Medium 97) Composition: NaCl 250.0 g/l Agar 20.0 g/l MgSO4 x 7 H2O 20.0 g/l Yeast extract 10.0 g/l Casamino acids 7.5 g/l Na3-citrate 3.0 g/l KCl 2.0 g/l FeSO4 x 7 H2O 0.05 g/l MnSO4 x H2O 0.0002 g/l Distilled water |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 4899 | positive | growth | 37 | mesophilic |
| 67770 | positive | growth | 37 | mesophilic |
Physiology and metabolism
compound production
- @ref: 67770
- compound: Extracellular poly(glutamic acid)
- excreted: yes
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 4899 | hypersaline soil | 30 km to the nord of Aswan | Egypt | EGY | Africa |
| 67770 | Hypersaline soil close to Aswan | Egypt | EGY | Africa |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Terrestrial | #Soil |
| #Condition | #Saline |
Safety information
risk assessment
- @ref: 4899
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
| @ref | description | accession | length | database | NCBI tax ID |
|---|---|---|---|---|---|
| 20218 | Natrialba aegyptia gene for 16S rRNA, complete sequence, strain: JCM 11194 | AB663454 | 1472 | ena | 129789 |
| 4899 | Natrialba aegyptiaca 16S small subunit ribosomal RNA gene, complete sequence | AF251941 | 1447 | ena | 129789 |
Genome sequences
| @ref | description | accession | assembly level | database | NCBI tax ID |
|---|---|---|---|---|---|
| 66792 | Natrialba aegyptia DSM 13077 | 2531839261 | draft | img | 1227491 |
| 67770 | Natrialba aegyptia DSM 13077 | GCA_000337535 | contig | ncbi | 1227491 |
| 66792 | Natrialba aegyptia DSM 13077 | 1227491.4 | wgs | patric | 1227491 |
GC content
- @ref: 67770
- GC-content: 61.5
- method: high performance liquid chromatography (HPLC)
External links
@ref: 4899
culture collection no.: DSM 13077, JCM 11194, CGMCC 1.6167, NBRC 102636
straininfo link
- @ref: 75452
- straininfo: 100798
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 4899 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 13077) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-13077 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 66792 | Julia Koblitz, Joaquim Sardà, Lorenz Christian Reimer, Boyke Bunk, Jörg Overmann | https://diaspora-project.de/progress.html#genomes | Automatically annotated for the DiASPora project (Digital Approaches for the Synthesis of Poorly Accessible Biodiversity Information) | |||
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||||
| 75452 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID100798.1 | StrainInfo: A central database for resolving microbial strain identifiers |