Strain identifier
BacDive ID: 5779
Type strain:
Species: Ilyobacter delafieldii
Strain Designation: 10cr1
Strain history: <- P.H. Janssen, 10cr1
NCBI tax ID(s): 933068 (species)
General
@ref: 2297
BacDive-ID: 5779
DSM-Number: 5704
keywords: 16S sequence, Bacteria, anaerobe, mesophilic
description: Ilyobacter delafieldii 10cr1 is an anaerobe, mesophilic bacterium that was isolated from anaerobic estuarine sediment.
NCBI tax id
- NCBI tax id: 933068
- Matching level: species
strain history
- @ref: 2297
- history: <- P.H. Janssen, 10cr1
doi: 10.13145/bacdive5779.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/fusobacteriota
- domain: Bacteria
- phylum: Fusobacteriota
- class: Fusobacteriia
- order: Fusobacteriales
- family: Fusobacteriaceae
- genus: Ilyobacter
- species: Ilyobacter delafieldii
- full scientific name: Ilyobacter delafieldii Janssen and Harfoot 1991
@ref: 2297
domain: Bacteria
phylum: Fusobacteria
class: Fusobacteriia
order: Fusobacteriales
family: Fusobacteriaceae
genus: Ilyobacter
species: Ilyobacter delafieldii
full scientific name: Ilyobacter delafieldii Janssen and Harfoot 1991
strain designation: 10cr1
type strain: yes
Culture and growth conditions
culture medium
- @ref: 2297
- name: CLOSTRIDIUM (GV) MEDIUM (DSMZ Medium 500)
- growth: yes
- link: https://mediadive.dsmz.de/medium/500
- composition: Name: CLOSTRIDIUM (GV) MEDIUM (DSMZ Medium 500; with strain-specific modifications) Composition: NaHCO3 2.98507 g/l NaCl 2.23881 g/l Sodium crotonate 1.99005 g/l Yeast extract 0.995025 g/l NH4Cl 0.497512 g/l MgSO4 x 7 H2O 0.497512 g/l K2HPO4 0.348259 g/l Na2S x 9 H2O 0.298507 g/l L-Cysteine HCl x H2O 0.298507 g/l CaCl2 x 2 H2O 0.248756 g/l KH2PO4 0.228856 g/l HCl 0.00248756 g/l FeSO4 x 7 H2O 0.00199005 g/l FeCl2 x 4 H2O 0.00149254 g/l NaOH 0.000497512 g/l Sodium resazurin 0.000497512 g/l CoCl2 x 6 H2O 0.000189055 g/l MnCl2 x 4 H2O 9.95025e-05 g/l Pyridoxine hydrochloride 9.95025e-05 g/l ZnCl2 6.96517e-05 g/l Riboflavin 4.97512e-05 g/l (DL)-alpha-Lipoic acid 4.97512e-05 g/l Nicotinic acid 4.97512e-05 g/l Calcium D-(+)-pantothenate 4.97512e-05 g/l Thiamine HCl 4.97512e-05 g/l p-Aminobenzoic acid 4.97512e-05 g/l Na2MoO4 x 2 H2O 3.58209e-05 g/l NiCl2 x 6 H2O 2.38806e-05 g/l Folic acid 1.99005e-05 g/l Biotin 1.99005e-05 g/l H3BO3 5.97015e-06 g/l Na2WO4 x 2 H2O 3.9801e-06 g/l Na2SeO3 x 5 H2O 2.98507e-06 g/l CuCl2 x 2 H2O 1.99005e-06 g/l Vitamin B12 9.95025e-07 g/l Distilled water
culture temp
- @ref: 2297
- growth: positive
- type: growth
- temperature: 37
- range: mesophilic
Physiology and metabolism
oxygen tolerance
- @ref: 2297
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 2297
- sample type: anaerobic estuarine sediment
- geographic location: Whangarei Harbour
- country: New Zealand
- origin.country: NZL
- continent: Australia and Oceania
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Environmental | #Aquatic | #Sediment |
#Condition | #Anoxic (anaerobic) |
taxonmaps
- @ref: 69479
- File name: preview.99_12125.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_34;96_3674;97_4513;98_5796;99_12125&stattab=map
- Last taxonomy: Firmicutes
- 16S sequence: FR733681
- Sequence Identity:
- Total samples: 261
- soil counts: 39
- aquatic counts: 147
- animal counts: 71
- plant counts: 4
Safety information
risk assessment
- @ref: 2297
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 2297
- description: Ilyobacter delafieldii partial 16S rRNA gene, type strain DSM5704T
- accession: FR733681
- length: 1499
- database: ena
- NCBI tax ID: 933068
GC content
- @ref: 2297
- GC-content: 29.0
External links
@ref: 2297
culture collection no.: DSM 5704, ATCC 49679
straininfo link
- @ref: 75258
- straininfo: 8998
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
2297 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 5704) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-5704 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
75258 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID8998.1 | StrainInfo: A central database for resolving microbial strain identifiers |