Strain identifier
BacDive ID: 5663
Type strain: 
Species: Winogradskyella lutea
Strain Designation: A73
Strain history: <- BJ Yoon, Jeju Natl. Univ
NCBI tax ID(s): 643262 (species)
version 8.1 (current version)
General
@ref: 16434
BacDive-ID: 5663
DSM-Number: 22624
keywords: 16S sequence, Bacteria, aerobe, mesophilic, Gram-negative
description: Winogradskyella lutea A73 is an aerobe, mesophilic, Gram-negative bacterium that was isolated from marine seawater.
NCBI tax id
- NCBI tax id: 643262
- Matching level: species
strain history
| @ref | history |
|---|---|
| 37879 | 2009, CECT |
| 16434 | <- B.-J. Yoon, Jeju National Univ., Rep. of Korea; A73 <- B.-J. Yoon |
| 67771 | <- BJ Yoon, Jeju Natl. Univ |
doi: 10.13145/bacdive5663.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/bacteroidota
- domain: Bacteria
- phylum: Bacteroidota
- class: Flavobacteriia
- order: Flavobacteriales
- family: Flavobacteriaceae
- genus: Winogradskyella
- species: Winogradskyella lutea
- full scientific name: Winogradskyella lutea Yoon et al. 2011
@ref: 16434
domain: Bacteria
phylum: Bacteroidetes
class: Flavobacteriia
order: Flavobacteriales
family: Flavobacteriaceae
genus: Winogradskyella
species: Winogradskyella lutea
full scientific name: Winogradskyella lutea Yoon et al. 2011
strain designation: A73
type strain: yes
Morphology
cell morphology
- @ref: 67771
- gram stain: negative
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 16434 | BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) | yes | https://mediadive.dsmz.de/medium/514 | Name: BACTO MARINE BROTH (DIFCO 2216) (DSMZ Medium 514) Composition: NaCl 19.45 g/l MgCl2 5.9 g/l Bacto peptone 5.0 g/l Na2SO4 3.24 g/l CaCl2 1.8 g/l Yeast extract 1.0 g/l KCl 0.55 g/l NaHCO3 0.16 g/l Fe(III) citrate 0.1 g/l KBr 0.08 g/l SrCl2 0.034 g/l H3BO3 0.022 g/l Na2HPO4 0.008 g/l Na-silicate 0.004 g/l NaF 0.0024 g/l (NH4)NO3 0.0016 g/l Distilled water |
| 37879 | Marine agar (MA) | yes | Distilled water make up to (1000.000 ml);Marine agar (55.100 g) |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 16434 | positive | growth | 28 | mesophilic |
| 37879 | positive | growth | 25 | mesophilic |
| 67771 | positive | growth | 30 | mesophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 67771
- oxygen tolerance: aerobe
observation
- @ref: 67771
- observation: quinones: MK-6
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 16434 | marine seawater | Jeju, coastal area | Republic of Korea | KOR | Asia |
| 67771 | From seawater | Jeju | Republic of Korea | KOR | Asia |
isolation source categories
- Cat1: #Environmental
- Cat2: #Aquatic
- Cat3: #Marine
taxonmaps
- @ref: 69479
- File name: preview.99_125693.png
- url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_107;96_1844;97_63335;98_84390;99_125693&stattab=map
- Last taxonomy: Winogradskyella
- 16S sequence: FJ919968
- Sequence Identity:
- Total samples: 121
- soil counts: 6
- aquatic counts: 81
- animal counts: 10
- plant counts: 24
Safety information
risk assessment
- @ref: 16434
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 16434
- description: Winogradskyella lutea strain A73 16S ribosomal RNA gene, partial sequence
- accession: FJ919968
- length: 1341
- database: ena
- NCBI tax ID: 643262
GC content
- @ref: 16434
- GC-content: 36.0
- method: thermal denaturation, midpoint method (Tm)
External links
@ref: 16434
culture collection no.: DSM 22624, KCTC 23237
straininfo link
- @ref: 75145
- straininfo: 377787
literature
- topic: Phylogeny
- Pubmed-ID: 20656809
- title: Winogradskyella lutea sp. nov., isolated from seawater, and emended description of the genus Winogradskyella.
- authors: Yoon BJ, Byun HD, Kim JY, Lee DH, Kahng HY, Oh DC
- journal: Int J Syst Evol Microbiol
- DOI: 10.1099/ijs.0.025528-0
- year: 2010
- mesh: Bacterial Typing Techniques, Base Composition, DNA, Bacterial/genetics, Fatty Acids/chemistry, Flavobacteriaceae/*classification/genetics/isolation & purification, Molecular Sequence Data, *Phylogeny, Pigmentation, RNA, Ribosomal, 16S/genetics, Republic of Korea, Seawater/*microbiology, Sequence Analysis, DNA, Vitamin K 2/analogs & derivatives/chemistry, Water Microbiology
- topic2: Genetics
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 16434 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 22624) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-22624 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 37879 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/7744 | ||
| 67771 | Curators of the KCTC | https://kctc.kribb.re.kr/En/Kctc | ||
| 69479 | João F Matias Rodrigues, Janko Tackmann,Gregor Rot, Thomas SB Schmidt, Lukas Malfertheiner, Mihai Danaila,Marija Dmitrijeva, Daniela Gaio, Nicolas Näpflin and Christian von Mering. University of Zurich. | https://microbeatlas.org/ | MicrobeAtlas 1.0 beta | |
| 75145 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID377787.1 | StrainInfo: A central database for resolving microbial strain identifiers |