Strain identifier
BacDive ID: 5389
Type strain: 
Species: Erythrobacter sp.
Strain history: CIP <- 1994, ACM <- J.A. Fuerst, Queensland Univ., Australia
NCBI tax ID(s): 1113 (species)
version 8.1 (current version)
General
@ref: 3571
BacDive-ID: 5389
DSM-Number: 9435
keywords: 16S sequence, Bacteria, mesophilic
description: Erythrobacter sp. DSM 9435 is a mesophilic bacterium that was isolated from eutrophic freshwater pond.
NCBI tax id
- NCBI tax id: 1113
- Matching level: species
strain history
| @ref | history |
|---|---|
| 3571 | <- J. A. Fuerst, ACM. Deposited as a strain of Porphyrobacter neustonensis |
| 121282 | CIP <- 1994, ACM <- J.A. Fuerst, Queensland Univ., Australia |
doi: 10.13145/bacdive5389.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Alphaproteobacteria
- order: Sphingomonadales
- family: Erythrobacteraceae
- genus: Erythrobacter
- species: Erythrobacter sp.
- full scientific name: Erythrobacter Shiba and Simidu 1982
synonyms
@ref synonym 20215 Erythromicrobium 20215 Porphyrobacter
@ref: 3571
domain: Bacteria
phylum: Proteobacteria
class: Alphaproteobacteria
order: Sphingomonadales
family: Erythrobacteraceae
genus: Erythrobacter
species: Erythrobacter sp.
full scientific name: Porphyrobacter sp.
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 3571 | PYGV AGAR (DSMZ Medium 621) | yes | https://mediadive.dsmz.de/medium/621 | Name: PYGV AGAR (DSMZ Medium 621) Composition: Agar 15.0 g/l MgSO4 x 7 H2O 0.625264 g/l Glucose 0.25 g/l Peptone 0.25 g/l Yeast extract 0.25 g/l Nitrilotriacetic acid 0.210526 g/l CaCl2 x 2 H2O 0.0703158 g/l FeSO4 x 7 H2O 0.00208422 g/l Na2MoO4 x 2 H2O 0.000266736 g/l Pyridoxine hydrochloride 0.0001 g/l p-Aminobenzoic acid 5e-05 g/l D-Calcium pantothenate 5e-05 g/l Nicotinamide 5e-05 g/l Thiamine-HCl x 2 H2O 5e-05 g/l Riboflavine 5e-05 g/l Folic acid 2e-05 g/l Biotin 2e-05 g/l Vitamin B12 1e-06 g/l Metall salt sol. 44 Distilled water |
| 34497 | MEDIUM 108 - for Porphyrobacter neustonensis | yes | Distilled water make up to (1000.000 ml);Agar (5.000 g);Glucose (0.250 g);Yeast extract (0.250 g);Peptone (0.250 g);Vitamins solution - M0417 (10.000 ml);Mineral solution - M0417 (20.000 ml) | |
| 121282 | CIP Medium 13 | yes | https://catalogue-crbip.pasteur.fr/fiche_milieu.xhtml?crbip=13 |
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 3571 | positive | growth | 30 | mesophilic |
| 34497 | positive | growth | 30 | mesophilic |
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent | isolation date |
|---|---|---|---|---|---|---|
| 3571 | eutrophic freshwater pond | Queensland, Brisbane, University Lake | Australia | AUS | Australia and Oceania | |
| 121282 | Environment, Fresh water lake | Brisbane | Australia | AUS | Australia and Oceania | 1983 |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Freshwater |
| #Environmental | #Aquatic | #Pond (small) |
Safety information
risk assessment
- @ref: 121282
- biosafety level: 1
- biosafety level comment: Risk group (French classification)
Sequence information
16S sequences
- @ref: 3571
- description: Porphyrobacter sp. 16S ribosomal RNA
- accession: L01783
- length: 1311
- database: ena
- NCBI tax ID: 1113
External links
@ref: 3571
culture collection no.: DSM 9435, ACM 2721, CIP 104072
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 3571 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 9435) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-9435 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 34497 | Curators of the CIP | https://brclims.pasteur.fr/brcWeb/souche/detail/1/15939 | ||
| 121282 | Curators of the CIP | Collection of Institut Pasteur (CIP 104072) | https://catalogue-crbip.pasteur.fr/fiche_catalogue.xhtml?crbip=CIP%20104072 |