Strain identifier

BacDive ID: 5215

Type strain: No

Species: Yersinia enterocolitica subsp. enterocolitica

Strain Designation: H 1424/94

Strain history: <- S. Aleksic, Hygiene Institut Hamburg; H 1424/94

NCBI tax ID(s): 150052 (subspecies)

« back to strain detail view
For citation purpose refer to the digital object identifier (doi) of the current version.
Archive
version 8.1 (current version):
version 8:
version 7.1:
version 7:
version 6:
version 5:
version 4.1:
version 4:
version 3:
version 2.1:
version 2:
version 1:
version 8.1 (current version)

General

@ref: 4394

BacDive-ID: 5215

DSM-Number: 11503

keywords: Bacteria, mesophilic

description: Yersinia enterocolitica subsp. enterocolitica H 1424/94 is a mesophilic bacterium that was isolated from clinical specimen.

NCBI tax id

  • NCBI tax id: 150052
  • Matching level: subspecies

strain history

  • @ref: 4394
  • history: <- S. Aleksic, Hygiene Institut Hamburg; H 1424/94

doi: 10.13145/bacdive5215.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Gammaproteobacteria
  • order: Enterobacterales
  • family: Yersiniaceae
  • genus: Yersinia
  • species: Yersinia enterocolitica subsp. enterocolitica
  • full scientific name: Yersinia enterocolitica subsp. enterocolitica (Schleifstein and Coleman 1939) Neubauer et al. 2000

@ref: 4394

domain: Bacteria

phylum: Proteobacteria

class: Gammaproteobacteria

order: Enterobacteriales, not validated

family: Yersiniaceae

genus: Yersinia

species: Yersinia enterocolitica subsp. enterocolitica

full scientific name: Yersinia enterocolitica subsp. enterocolitica (Schleifstein and Coleman 1939) Neubauer et al. 2000

strain designation: H 1424/94

type strain: no

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
4394TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92)yeshttps://mediadive.dsmz.de/medium/92Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water
4394COLUMBIA BLOOD MEDIUM (DSMZ Medium 693)yeshttps://mediadive.dsmz.de/medium/693Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base

culture temp

  • @ref: 4394
  • growth: positive
  • type: growth
  • temperature: 28
  • range: mesophilic

Physiology and metabolism

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
6836830849L-arabinose+fermentation
6836827613amygdalin+fermentation
6836828053melibiose-fermentation
6836817992sucrose+fermentation
6836862345L-rhamnose-fermentation
6836830911sorbitol+fermentation
6836817268myo-inositol+fermentation
6836816899D-mannitol+fermentation
6836817634D-glucose+fermentation
683685291gelatin-hydrolysis
6836827897tryptophan+energy source
6836816199urea+hydrolysis
6836816947citrate-assimilation
6836818257ornithine+degradation
6836825094lysine-degradation
6836829016arginine-hydrolysis

metabolite production

@refChebi-IDmetaboliteproduction
6836835581indoleyes
6836816136hydrogen sulfideno

metabolite tests

  • @ref: 68368
  • Chebi-ID: 35581
  • metabolite: indole
  • indole test: +

enzymes

@refvalueactivityec
68368cytochrome oxidase-1.9.3.1
68368gelatinase-
68368tryptophan deaminase-4.1.99.1
68368urease+3.5.1.5
68368ornithine decarboxylase+4.1.1.17
68368lysine decarboxylase-4.1.1.18
68368arginine dihydrolase-3.5.3.6
68368beta-galactosidase+3.2.1.23

API 20E

@refONPGADH ArgLDC LysODCCITH2SURETDA TrpINDVPGELGLUMANINOSorRHASACMELAMYARAOX
4394+--+--+-+--++++-+-++-
4394+--+--+-++-++++-+-++-

Isolation, sampling and environmental information

isolation

  • @ref: 4394
  • sample type: clinical specimen
  • geographic location: Hamburg
  • country: Germany
  • origin.country: DEU
  • continent: Europe
  • latitude: 53.5354
  • longitude: 10.0452

isolation source categories

Cat1Cat2Cat3
#Infection#Patient#Specimen
#Infection#Medical environment#Clinic

Safety information

risk assessment

  • @ref: 4394
  • biosafety level: 2
  • biosafety level comment: Risk group (German classification)

External links

@ref: 4394

culture collection no.: DSM 11503

straininfo link

  • @ref: 74707
  • straininfo: 49127

Reference

@idauthorscataloguedoi/urltitle
4394Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11503)https://www.dsmz.de/collection/catalogue/details/culture/DSM-11503
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
68368Automatically annotated from API 20E
74707Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID49127.1StrainInfo: A central database for resolving microbial strain identifiers