Strain identifier
BacDive ID: 5060
Type strain:
Species: Proteus mirabilis
Strain Designation: D1
Strain history: <- CCUG <- ATCC <- C. A. Stuart <- S. Bernstein
NCBI tax ID(s): 584 (species)
General
@ref: 7462
BacDive-ID: 5060
DSM-Number: 18254
keywords: Bacteria, aerobe, mesophilic, human pathogen
description: Proteus mirabilis D1 is an aerobe, mesophilic human pathogen of the family Morganellaceae.
NCBI tax id
- NCBI tax id: 584
- Matching level: species
strain history
- @ref: 7462
- history: <- CCUG <- ATCC <- C. A. Stuart <- S. Bernstein
doi: 10.13145/bacdive5060.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Morganellaceae
- genus: Proteus
- species: Proteus mirabilis
- full scientific name: Proteus mirabilis Hauser 1885 (Approved Lists 1980)
@ref: 7462
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacteriales, not validated
family: Morganellaceae
genus: Proteus
species: Proteus mirabilis
full scientific name: Proteus mirabilis Hauser 1885
strain designation: D1
type strain: no
Morphology
multimedia
- @ref: 7462
- multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_18254.jpg
- intellectual property rights: © Leibniz-Institut DSMZ
Culture and growth conditions
culture medium
@ref | name | growth | link | composition |
---|---|---|---|---|
7462 | TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) | yes | https://mediadive.dsmz.de/medium/535 | Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water |
7462 | TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) | yes | https://mediadive.dsmz.de/medium/92 | Name: TRYPTICASE SOY YEAST EXTRACT MEDIUM (DSMZ Medium 92) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Yeast extract 3.0 g/l Distilled water |
7462 | COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) | yes | https://mediadive.dsmz.de/medium/693 | Name: COLUMBIA BLOOD MEDIUM (DSMZ Medium 693) Composition: Defibrinated sheep blood 50.0 g/l Columbia agar base |
culture temp
@ref | growth | type | temperature | range |
---|---|---|---|---|
7462 | positive | growth | 30 | mesophilic |
52038 | positive | growth | 37 | mesophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 52038
- oxygen tolerance: aerobe
compound production
- @ref: 7462
- compound: Strong Forssmann antigen (ATCC catalogue)
metabolite utilization
@ref | Chebi-ID | metabolite | utilization activity | kind of utilization tested |
---|---|---|---|---|
68368 | 30849 | L-arabinose | - | fermentation |
68368 | 27613 | amygdalin | - | fermentation |
68368 | 28053 | melibiose | - | fermentation |
68368 | 62345 | L-rhamnose | - | fermentation |
68368 | 30911 | sorbitol | - | fermentation |
68368 | 17268 | myo-inositol | - | fermentation |
68368 | 16899 | D-mannitol | - | fermentation |
68368 | 17634 | D-glucose | + | fermentation |
68368 | 5291 | gelatin | - | hydrolysis |
68368 | 27897 | tryptophan | - | energy source |
68368 | 16199 | urea | + | hydrolysis |
68368 | 16947 | citrate | + | assimilation |
68368 | 18257 | ornithine | + | degradation |
68368 | 25094 | lysine | - | degradation |
68368 | 29016 | arginine | - | hydrolysis |
68374 | 18257 | ornithine | + | degradation |
68374 | 29016 | arginine | - | hydrolysis |
68374 | 25094 | lysine | - | degradation |
68374 | 16199 | urea | + | hydrolysis |
68374 | 18403 | L-arabitol | - | builds acid from |
68374 | 18024 | D-galacturonic acid | - | builds acid from |
68374 | Potassium 5-ketogluconate | - | builds acid from | |
68374 | 16899 | D-mannitol | - | builds acid from |
68374 | 17306 | maltose | - | builds acid from |
68374 | 15963 | ribitol | - | builds acid from |
68374 | 18394 | palatinose | - | builds acid from |
68374 | 15792 | malonate | - | assimilation |
68374 | 27897 | tryptophan | - | energy source |
68374 | 17634 | D-glucose | + | builds acid from |
68374 | 17992 | sucrose | - | builds acid from |
68374 | 30849 | L-arabinose | - | builds acid from |
68374 | 18333 | D-arabitol | - | builds acid from |
68374 | 27082 | trehalose | + | builds acid from |
68374 | 62345 | L-rhamnose | - | builds acid from |
68374 | 17268 | myo-inositol | - | builds acid from |
68374 | 17057 | cellobiose | - | builds acid from |
68374 | 30911 | sorbitol | - | builds acid from |
metabolite production
@ref | Chebi-ID | metabolite | production |
---|---|---|---|
68374 | 35581 | indole | no |
68368 | 15688 | acetoin | no |
68368 | 35581 | indole | no |
68368 | 16136 | hydrogen sulfide | yes |
metabolite tests
@ref | Chebi-ID | metabolite | indole test | voges-proskauer-test |
---|---|---|---|---|
68374 | 35581 | indole | - | |
68368 | 15688 | acetoin | - | |
68368 | 35581 | indole | - |
enzymes
@ref | value | activity | ec |
---|---|---|---|
68374 | L-aspartate arylamidase | + | 3.4.11.21 |
68374 | alpha-maltosidase | - | |
68374 | alpha-galactosidase | - | 3.2.1.22 |
68374 | alpha-glucosidase | - | 3.2.1.20 |
68374 | beta-galactosidase | - | 3.2.1.23 |
68374 | N-acetyl-beta-glucosaminidase | - | 3.2.1.52 |
68374 | beta-glucuronidase | - | 3.2.1.31 |
68374 | beta-glucosidase | - | 3.2.1.21 |
68374 | lipase | - | |
68374 | urease | + | 3.5.1.5 |
68374 | lysine decarboxylase | - | 4.1.1.18 |
68374 | arginine dihydrolase | - | 3.5.3.6 |
68374 | ornithine decarboxylase | + | 4.1.1.17 |
68368 | cytochrome oxidase | - | 1.9.3.1 |
68368 | gelatinase | - | |
68368 | tryptophan deaminase | + | 4.1.99.1 |
68368 | urease | + | 3.5.1.5 |
68368 | ornithine decarboxylase | + | 4.1.1.17 |
68368 | lysine decarboxylase | - | 4.1.1.18 |
68368 | arginine dihydrolase | - | 3.5.3.6 |
68368 | beta-galactosidase | - | 3.2.1.23 |
API 20E
@ref | ONPG | ADH Arg | LDC Lys | ODC | CIT | H2S | URE | TDA Trp | IND | VP | GEL | GLU | MAN | INO | Sor | RHA | SAC | MEL | AMY | ARA | OX |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
7462 | - | - | - | + | + | + | + | + | - | - | - | + | - | - | - | - | +/- | - | - | - | - |
API ID32E
@ref | ODC | ADH Arg | LDC Lys | URE | LARL | GAT | 5KG | LIP | RP | beta GLU | MAN | MAL | ADO | PLE | beta GUR | MNT | IND | beta NAG | beta GAL | GLU | SAC | LARA | DARL | alpha GLU | alpha GAL | TRE | RHA | INO | CEL | SOR | alphaMAL | AspA |
---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|---|
52038 | + | - | - | + | - | - | - | - | + | - | - | - | - | - | - | - | - | - | - | + | - | - | - | - | - | + | - | - | - | - | - | + |
Safety information
risk assessment
- @ref: 7462
- pathogenicity human: yes
- pathogenicity animal: yes
- biosafety level: 2
- biosafety level comment: Risk group (German classification)
External links
@ref: 7462
culture collection no.: DSM 18254, ATCC 12453, CCUG 34293
straininfo link
- @ref: 74555
- straininfo: 35585
literature
topic | Pubmed-ID | title | authors | journal | DOI | year | mesh | topic2 |
---|---|---|---|---|---|---|---|---|
Metabolism | 25043121 | Structure-activity relationship studies of microbiologically active thiosemicarbazides derived from hydroxybenzoic acid hydrazides. | Plech T, Paneth A, Kapron B, Kosikowska U, Malm A, Strzelczyk A, Staczek P | Chem Biol Drug Des | 10.1111/cbdd.12392 | 2014 | Anti-Bacterial Agents/chemical synthesis/*chemistry/pharmacology, Bacterial Proteins/antagonists & inhibitors/metabolism, DNA Gyrase/chemistry/metabolism, DNA Topoisomerase IV/antagonists & inhibitors/metabolism, Gram-Negative Bacteria/drug effects, Gram-Positive Bacteria/drug effects, Hydrazines/*chemistry, Hydroxybenzoates/chemistry, Microbial Sensitivity Tests, Semicarbazides/chemical synthesis/*chemistry/pharmacology, Structure-Activity Relationship | Pathogenicity |
Pathogenicity | 25837813 | Allicin from garlic inhibits the biofilm formation and urease activity of Proteus mirabilis in vitro. | Ranjbar-Omid M, Arzanlou M, Amani M, Shokri Al-Hashem SK, Amir Mozafari N, Peeri Doghaheh H | FEMS Microbiol Lett | 10.1093/femsle/fnv049 | 2015 | Biofilms/*drug effects/growth & development, Disulfides, Garlic/chemistry, Hemolysin Proteins/metabolism, Microbial Sensitivity Tests, Proteus mirabilis/*drug effects/enzymology/*physiology, Sulfinic Acids/isolation & purification/*pharmacology, Urease/*antagonists & inhibitors | Enzymology |
Phylogeny | 26782985 | Pseudomonas putida Strain FStm2 Isolated from Shark Skin: A Potential Source of Bacteriocin. | Ahmad A, Hamid R, Dada AC, Usup G | Probiotics Antimicrob Proteins | 10.1007/s12602-013-9140-4 | 2013 | ||
Pathogenicity | 29619676 | Synthesis and in vitro antimicrobial activity screening of new pipemidic acid derivatives. | Popiolek L, Biernasiuk A, Paruch K, Malm A, Wujec M | Arch Pharm Res | 10.1007/s12272-018-1025-3 | 2018 | Anti-Bacterial Agents/chemical synthesis/*pharmacology, Gram-Negative Bacteria/*drug effects, Microbial Sensitivity Tests, Pipemidic Acid/analogs & derivatives/chemical synthesis/*pharmacology, Thiones/chemistry, Triazoles/chemistry |
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
7462 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 18254) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-18254 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
52038 | Curators of the CCUG | Culture Collection University of Gothenburg (CCUG) (CCUG 34293) | https://www.ccug.se/strain?id=34293 | |
68368 | Automatically annotated from API 20E | |||
68374 | Automatically annotated from API ID32E | |||
74555 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID35585.1 | StrainInfo: A central database for resolving microbial strain identifiers |