Strain identifier
BacDive ID: 5024
Type strain: 
Species: Pectobacterium carotovorum
Strain Designation: 39-1/1
Strain history: <- DSM <- L.E. Webb <- J. Duben, 39-1/1
NCBI tax ID(s): 554 (species)
General
@ref: 9179
BacDive-ID: 5024
DSM-Number: 30170
keywords: Bacteria, mesophilic, plant pathogen
description: Pectobacterium carotovorum 39-1/1 is a mesophilic plant pathogen that was isolated from Solanum tuberosum "Maritta", soft rot of potato tuber.
NCBI tax id
- NCBI tax id: 554
- Matching level: species
strain history
- @ref: 9179
- history: <- DSM <- L.E. Webb <- J. Duben, 39-1/1
doi: 10.13145/bacdive5024.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Pectobacteriaceae
- genus: Pectobacterium
- species: Pectobacterium carotovorum
- full scientific name: Pectobacterium carotovorum (Jones 1901) Waldee 1945 (Approved Lists 1980)
synonyms
@ref synonym 20215 Bacillus carotovorus 20215 Erwinia carotovora
@ref: 9179
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacteriales, not validated
family: Pectobacteriaceae
genus: Pectobacterium
species: Pectobacterium carotovorum
full scientific name: Pectobacterium carotovorum (Jones 1901) Waldee 1945 emend. Gardan et al. 2003
strain designation: 39-1/1
type strain: no
Culture and growth conditions
culture medium
- @ref: 9179
- name: REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a)
- growth: yes
- link: https://mediadive.dsmz.de/medium/1a
- composition: Name: REACTIVATION WITH LIQUID MEDIUM 1 (DSMZ Medium 1a) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water
culture temp
- @ref: 9179
- growth: positive
- type: growth
- temperature: 26
- range: mesophilic
Isolation, sampling and environmental information
isolation
- @ref: 9179
- sample type: Solanum tuberosum "Maritta", soft rot of potato tuber
- host species: Solanum tuberosum
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Plants | #Decomposing plant |
| #Host | #Plants | #Herbaceous plants (Grass,Crops) |
| #Host Body-Site | #Plant | #Root (Rhizome) |
Safety information
risk assessment
- @ref: 9179
- pathogenicity plant: yes
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
External links
@ref: 9179
culture collection no.: DSM 30170, DSM 60337
straininfo link
- @ref: 74519
- straininfo: 49702
literature
- topic: Pathogenicity
- Pubmed-ID: 36147289
- title: Pectobacterium Phage Jarilo Displays Broad Host Range and Represents a Novel Genus of Bacteriophages Within the Family Autographiviridae.
- authors: Pedersen JS, Carstens AB, Djurhuus AM, Kot W, Neve H, Hansen LH
- journal: Phage (New Rochelle)
- DOI: 10.1089/phage.2020.0037
- year: 2020
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 9179 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 30170) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-30170 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 74519 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49702.1 | StrainInfo: A central database for resolving microbial strain identifiers |