Strain identifier
BacDive ID: 5020
Type strain: 
Species: Pectobacterium atrosepticum
Strain Designation: 34-1/1
Strain history: <- DSM 60210 (Erwinia atroseptica) <- L.E. Webb <- S. Köhn, 34-1/1
NCBI tax ID(s): 29471 (species)
General
@ref: 9188
BacDive-ID: 5020
DSM-Number: 30185
keywords: Bacteria, plant pathogen
description: Pectobacterium atrosepticum 34-1/1 is a plant pathogen that was isolated from Solanum tuberosum "Bodenkraft", brown soft rot of potato stem.
NCBI tax id
- NCBI tax id: 29471
- Matching level: species
strain history
- @ref: 9188
- history: <- DSM 60210 (Erwinia atroseptica) <- L.E. Webb <- S. Köhn, 34-1/1
doi: 10.13145/bacdive5020.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Gammaproteobacteria
- order: Enterobacterales
- family: Pectobacteriaceae
- genus: Pectobacterium
- species: Pectobacterium atrosepticum
- full scientific name: Pectobacterium atrosepticum (van Hall 1902) Gardan et al. 2003
synonyms
@ref synonym 20215 Bacillus atrosepticus 20215 Erwinia carotovora subsp. atroseptica 20215 Pectobacterium carotovorum subsp. atrosepticum
@ref: 9188
domain: Bacteria
phylum: Proteobacteria
class: Gammaproteobacteria
order: Enterobacteriales, not validated
family: Pectobacteriaceae
genus: Pectobacterium
species: Pectobacterium atrosepticum
full scientific name: Pectobacterium atrosepticum (van Hall 1902) Gardan et al. 2003
strain designation: 34-1/1
type strain: no
Culture and growth conditions
culture medium
| @ref | name | growth | link | composition |
|---|---|---|---|---|
| 9188 | NUTRIENT AGAR (DSMZ Medium 1) | yes | https://mediadive.dsmz.de/medium/1 | Name: NUTRIENT AGAR (DSMZ Medium 1) Composition: Agar 15.0 g/l Peptone 5.0 g/l Meat extract 3.0 g/l Distilled water |
| 9188 | GLUCOSE YEAST EXTRACT MEDIUM (DSMZ Medium 54) | yes | https://mediadive.dsmz.de/medium/54 | Name: GLUCOSE YEAST EXTRACT MEDIUM (DSMZ Medium 54) Composition: CaCO3 20.0 g/l Glucose 20.0 g/l Agar 17.0 g/l Yeast extract 10.0 g/l Distilled water |
culture temp
- @ref: 9188
- growth: positive
- type: growth
- temperature: 27
Isolation, sampling and environmental information
isolation
- @ref: 9188
- sample type: Solanum tuberosum "Bodenkraft", brown soft rot of potato stem
- host species: Solanum tuberosum
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Host | #Plants | #Decomposing plant |
| #Host | #Plants | #Herbaceous plants (Grass,Crops) |
| #Host Body-Site | #Plant | #Stem (Branch) |
Safety information
risk assessment
- @ref: 9188
- pathogenicity plant: yes
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
External links
@ref: 9188
culture collection no.: DSM 30185
straininfo link
- @ref: 74515
- straininfo: 49705
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 9188 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 30185) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-30185 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 74515 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49705.1 | StrainInfo: A central database for resolving microbial strain identifiers |