Strain identifier

BacDive ID: 4262

Type strain: Yes

Species: Dietzia aerolata

Strain Designation: Sj14a

Strain history: CCM 7659 <-- P. Kämpfer Sj14a.

NCBI tax ID(s): 595984 (species)

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General

@ref: 16296

BacDive-ID: 4262

DSM-Number: 45334

keywords: 16S sequence, Bacteria, aerobe, mesophilic, Gram-positive, coccus-shaped

description: Dietzia aerolata Sj14a is an aerobe, mesophilic, Gram-positive bacterium that was isolated from air of a duck barn.

NCBI tax id

  • NCBI tax id: 595984
  • Matching level: species

strain history

@refhistory
16296<- P. Kämpfer, Univ. Giessen, Germany; Sj14a <- H. Martin
67770CCM 7659 <-- P. Kämpfer Sj14a.

doi: 10.13145/bacdive4262.20230509.8.1

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/actinomycetota
  • domain: Bacteria
  • phylum: Actinomycetota
  • class: Actinomycetes
  • order: Mycobacteriales
  • family: Dietziaceae
  • genus: Dietzia
  • species: Dietzia aerolata
  • full scientific name: Dietzia aerolata Kämpfer et al. 2010

@ref: 16296

domain: Bacteria

phylum: Actinobacteria

class: Actinobacteria

order: Actinomycetales

family: Dietziaceae

genus: Dietzia

species: Dietzia aerolata

full scientific name: Dietzia aerolata Kämpfer et al. 2010

strain designation: Sj14a

type strain: yes

Morphology

cell morphology

  • @ref: 29420
  • gram stain: positive
  • cell width: 1.25 µm
  • cell shape: coccus-shaped

pigmentation

  • @ref: 29420
  • production: yes

multimedia

  • @ref: 16296
  • multimedia content: https://www.dsmz.de/microorganisms/photos/DSM_45334.jpg
  • caption: Medium 65 28°C
  • intellectual property rights: © Leibniz-Institut DSMZ

Culture and growth conditions

culture medium

@refnamegrowthlinkcomposition
16296TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535)yeshttps://mediadive.dsmz.de/medium/535Name: TRYPTICASE SOY BROTH AGAR (DSMZ Medium 535) Composition: Trypticase soy broth 30.0 g/l Agar 15.0 g/l Distilled water
16296GYM STREPTOMYCES MEDIUM (DSMZ Medium 65)yeshttps://mediadive.dsmz.de/medium/65Name: GYM STREPTOMYCES MEDIUM (DSMZ Medium 65) Composition: Agar 18.0 g/l Malt extract 10.0 g/l Yeast extract 4.0 g/l Glucose 4.0 g/l CaCO3 2.0 g/l Distilled water

culture temp

@refgrowthtypetemperaturerange
16296positivegrowth28mesophilic
29420positivegrowth25-30mesophilic
67770positivegrowth28mesophilic

Physiology and metabolism

oxygen tolerance

  • @ref: 29420
  • oxygen tolerance: aerobe

observation

  • @ref: 67770
  • observation: quinones: MK-8(H2)

metabolite utilization

@refChebi-IDmetaboliteutilization activitykind of utilization tested
2942017234glucose+carbon source
2942037684mannose+carbon source

enzymes

@refvalueactivityec
29420catalase+1.11.1.6
29420cytochrome oxidase+1.9.3.1

Isolation, sampling and environmental information

isolation

@refsample typegeographic locationcountryorigin.countrycontinent
16296air of a duck barnBerlinGermanyDEUEurope
61435Air of a duck stableBerlinGermanyDEUEurope
67770Air of a duck barn

isolation source categories

Cat1Cat2Cat3
#Engineered#Agriculture#Livestock (Husbandry)
#Environmental#Air#Indoor Air
#Host#Birds

Safety information

risk assessment

  • @ref: 16296
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

16S sequences

  • @ref: 16296
  • description: Dietzia aerolata partial 16S rRNA gene, type strain Sj14aT
  • accession: FM995533
  • length: 1388
  • database: ena
  • NCBI tax ID: 595984

External links

@ref: 16296

culture collection no.: DSM 45334, CCM 7659, CCUG 57738, JCM 17966

straininfo link

  • @ref: 73757
  • straininfo: 398887

literature

  • topic: Phylogeny
  • Pubmed-ID: 19651718
  • title: Dietzia aerolata sp. nov., isolated from the air of a duck barn, and emended description of the genus Dietzia Rainey et al. 1995.
  • authors: Kampfer P, Langer S, Martin E, Jackel U, Busse HJ
  • journal: Int J Syst Evol Microbiol
  • DOI: 10.1099/ijs.0.012807-0
  • year: 2009
  • mesh: Actinomycetales/*classification/genetics/physiology, *Air Microbiology, Animal Husbandry, Animals, Base Sequence, DNA Probes, DNA, Bacterial/chemistry, Ducks, Molecular Sequence Data, Phylogeny, RNA, Bacterial/genetics, RNA, Ribosomal, 16S/genetics, Sequence Homology, Nucleic Acid
  • topic2: Genetics

Reference

@idauthorscataloguedoi/urltitleID_cross_referencepubmed
16296Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 45334)https://www.dsmz.de/collection/catalogue/details/culture/DSM-45334
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
29420Barberan A, Caceres Velazquez H, Jones S, Fierer N.10.1128/mSphere.00237-17Hiding in Plain Sight: Mining Bacterial Species Records for Phenotypic Trait Information2582728776041
61435Curators of the CCUGCulture Collection University of Gothenburg (CCUG) (CCUG 57738)https://www.ccug.se/strain?id=57738
67770Curators of the JCMhttps://jcm.brc.riken.jp/en/
73757Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID398887.1StrainInfo: A central database for resolving microbial strain identifiers