Strain identifier
BacDive ID: 4193
Type strain: 
Species: Stetteria hydrogenophila
Strain Designation: 4ABC
Strain history: DSM 11227 <-- M. Thomm 4ABC.
NCBI tax ID(s): 52001 (species)
version 8.1 (current version)
General
@ref: 4253
BacDive-ID: 4193
DSM-Number: 11227
keywords: 16S sequence, Archaea, anaerobe, hyperthermophilic
description: Stetteria hydrogenophila 4ABC is an anaerobe, hyperthermophilic archaeon that was isolated from sediment of marine geothermal system.
NCBI tax id
- NCBI tax id: 52001
- Matching level: species
strain history
| @ref | history |
|---|---|
| 4253 | <- M. Thomm, Univ. Kiel, Germany; 4ABC <- S. Peinemann-Simon and M. Thomm {1994} |
| 67770 | DSM 11227 <-- M. Thomm 4ABC. |
doi: 10.13145/bacdive4193.20230509.8.1
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/archaea
- keyword: phylum/thermoproteota
- domain: Archaea
- phylum: Thermoproteota
- class: Thermoprotei
- order: Desulfurococcales
- family: Desulfurococcaceae
- genus: Stetteria
- species: Stetteria hydrogenophila
- full scientific name: Stetteria hydrogenophila Jochimsen et al. 1998
@ref: 4253
domain: Archaea
phylum: Crenarchaeota
class: Thermoprotei
order: Desulfurococcales
family: Desulfurococcaceae
genus: Stetteria
species: Stetteria hydrogenophila
full scientific name: Stetteria hydrogenophila Jochimsen et al. 1998
strain designation: 4ABC
type strain: yes
Culture and growth conditions
culture medium
- @ref: 4253
- name: STETTERIA MEDIUM (DSMZ Medium 795)
- growth: yes
- link: https://mediadive.dsmz.de/medium/795
- composition: Name: STETTERIA MEDIUM (DSMZ Medium 795) Composition: Sulfur 9.82318 g/l MgCl2 x 6 H2O 5.40275 g/l Peptone 1.96464 g/l Yeast extract 0.982318 g/l KCl 0.638507 g/l Na2S x 9 H2O 0.491159 g/l KH2PO4 0.491159 g/l NaHCO3 0.157171 g/l NaBr 0.0982318 g/l MgSO4 x 7 H2O 0.0442043 g/l Nitrilotriacetic acid 0.0221022 g/l SrCl2 x 6 H2O 0.0147348 g/l NaCl 0.0147348 g/l Na3-citrate 0.00982318 g/l MnSO4 x H2O 0.00736739 g/l NiCl2 x 6 H2O 0.00294695 g/l CoSO4 x 7 H2O 0.00265226 g/l ZnSO4 x 7 H2O 0.00265226 g/l FeSO4 x 7 H2O 0.00147348 g/l CaCl2 x 2 H2O 0.00147348 g/l Sodium resazurin 0.000491159 g/l AlK(SO4)2 x 12 H2O 0.000294695 g/l H3BO3 0.000147348 g/l Na2MoO4 x 2 H2O 0.000147348 g/l CuSO4 x 5 H2O 0.000147348 g/l KI 4.91159e-05 g/l Na2WO4 x 2 H2O 5.89391e-06 g/l Na2SeO3 x 5 H2O 4.42043e-06 g/l Distilled water
culture temp
| @ref | growth | type | temperature | range |
|---|---|---|---|---|
| 4253 | positive | growth | 93 | hyperthermophilic |
| 67770 | positive | growth | 95 | hyperthermophilic |
Physiology and metabolism
oxygen tolerance
- @ref: 4253
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
| @ref | sample type | geographic location | country | origin.country | continent |
|---|---|---|---|---|---|
| 4253 | sediment of marine geothermal system | Milos, Paleohori Bay | Greece | GRC | Europe |
| 67770 | Marine sediment of a hydrothermal system at PaleohoriBay in Milos | Greece | GRC | Europe |
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Marine |
| #Environmental | #Aquatic | #Sediment |
Safety information
risk assessment
- @ref: 4253
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
16S sequences
- @ref: 4253
- description: S.hydrogenophila 16S rRNA gene
- accession: Y07784
- length: 1316
- database: ena
- NCBI tax ID: 52001
GC content
| @ref | GC-content | method |
|---|---|---|
| 4253 | 65 | |
| 67770 | 65 | high performance liquid chromatography (HPLC) |
External links
@ref: 4253
culture collection no.: DSM 11227, JCM 10135
straininfo link
- @ref: 73693
- straininfo: 49053
literature
- topic: Phylogeny
- Pubmed-ID: 9680304
- title: Stetteria hydrogenophila, gen. nov. and sp. nov., a novel mixotrophic sulfur-dependent crenarchaeote isolated from Milos, Greece.
- authors: Jochimsen B, Peinemann-Simon S, Volker H, Stuben D, Botz R, Stoffers P, Dando PR, Thomm M
- journal: Extremophiles
- DOI: 10.1007/s007920050016
- year: 1997
- mesh: Desulfurococcaceae/genetics/growth & development/*isolation & purification/metabolism, Greece, Hydrogen/*metabolism, Microscopy, Electron, Phylogeny, Sulfur/*metabolism, *Water Microbiology
- topic2: Metabolism
Reference
| @id | authors | catalogue | doi/url | title |
|---|---|---|---|---|
| 4253 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 11227) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-11227 | |
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
| 67770 | Curators of the JCM | https://jcm.brc.riken.jp/en/ | ||
| 73693 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID49053.1 | StrainInfo: A central database for resolving microbial strain identifiers |