General

@ref: 2973

BacDive-ID: 4094

DSM-Number: 7074

keywords: 16S sequence, Bacteria, anaerobe, mesophilic

description: Desulfovibrio sp. DDv is an anaerobe, mesophilic bacterium that was isolated from rice field soils.

NCBI tax id

• NCBI tax id: 885
• Matching level: species

strain history

• @ref: 2973
• history: <- J.-L. Garcia, Lab. Microbiologie ORSTOM, Univ. de Provence, Marseille, France; DDv <- A. Ouattara

doi: 10.13145/bacdive4094.20230509.8.1

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Deltaproteobacteria
• order: Desulfovibrionales
• family: Desulfovibrionaceae
• genus: Desulfovibrio
• species: Desulfovibrio sp.
• full scientific name: Desulfovibrio Kluyver and van Niel 1936 (Approved Lists 1980)

• synonyms

  @ref	synonym
  20215	Alteridesulfovibrio
  20215	Frigididesulfovibrio
  20215	Desulfomonas
  20215	Psychrodesulfovibrio
  20215	Aminidesulfovibrio

@ref: 2973

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Desulfovibrionales

family: Desulfovibrionaceae

genus: Desulfovibrio

species: Desulfovibrio sp.

full scientific name: Desulfovibrio sp.

strain designation: DDv

type strain: no

Culture and growth conditions

culture medium

• @ref: 2973
• name: DESULFOVIBRIO (MV) MEDIUM (DSMZ Medium 641)
• growth: yes
• link: https://mediadive.dsmz.de/medium/641
• composition: Name: DESULFOVIBRIO (MV) MEDIUM (DSMZ Medium 641) Composition: Na-DL-lactate 2.49252 g/l Na2SO4 1.99402 g/l NH4Cl 0.997009 g/l Yeast extract 0.997009 g/l Na2CO3 0.997009 g/l MgSO4 x 7 H2O 0.997009 g/l Na2S2O3 x 5 H2O 0.997009 g/l KH2PO4 0.498504 g/l Na2S x 9 H2O 0.0997009 g/l CaCl2 x 2 H2O 0.0997009 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l MnCl2 x 4 H2O 9.97009e-05 g/l Pyridoxine hydrochloride 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l Riboflavin 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

culture temp

• @ref: 2973
• growth: positive
• type: growth
• temperature: 35
• range: mesophilic

Physiology and metabolism

oxygen tolerance

• @ref: 2973
• oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

• @ref: 2973
• sample type: rice field soils
• geographic location: Bama
• country: Burkina Faso
• origin.country: BFA
• continent: Africa

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_6970.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_288;96_1542;97_1841;98_2260;99_6970&stattab=map
• Last taxonomy: Desulfovibrionaceae
• 16S sequence: AF273083
• Sequence Identity:
• Total samples: 35
• soil counts: 1
• aquatic counts: 25
• animal counts: 6
• plant counts: 3

Sequence information

16S sequences

• @ref: 2973
• description: Desulfovibrio oryzae 16S ribosomal RNA gene, partial sequence
• accession: AF273083
• length: 1540
• database: ena
• NCBI tax ID: 128787

External links

@ref: 2973

culture collection no.: DSM 7074

straininfo link

• @ref: 73597
• straininfo: 408370

Reference