Strain identifier

BacDive ID: 4006

Type strain: No

Species: Desulfobulbus propionicus

Strain Designation: MUD

Strain history: <- M. Tasaki and Y. Kamagata, MUD

NCBI tax ID(s): 894 (species)

For citation purpose refer to the digital object identifier (doi) of the current version.
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General

@ref: 2714

BacDive-ID: 4006

DSM-Number: 6523

keywords: Bacteria, anaerobe

description: Desulfobulbus propionicus MUD is an anaerobe bacterium that was isolated from sludge, UASB digestor.

NCBI tax id

  • NCBI tax id: 894
  • Matching level: species

strain history

  • @ref: 2714
  • history: <- M. Tasaki and Y. Kamagata, MUD

doi: 10.13145/bacdive4006.20240510.9

Name and taxonomic classification

LPSN

  • @ref: 20215
  • description: domain/bacteria
  • keyword: phylum/pseudomonadota
  • domain: Bacteria
  • phylum: Pseudomonadota
  • class: Deltaproteobacteria
  • order: Desulfobacterales
  • family: Desulfobulbaceae
  • genus: Desulfobulbus
  • species: Desulfobulbus propionicus
  • full scientific name: Desulfobulbus propionicus Widdel 1981
  • synonyms

    • @ref: 20215
    • synonym: Desulfobulbus propionicus

@ref: 2714

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Desulfobacterales

family: Desulfobulbaceae

genus: Desulfobulbus

species: Desulfobulbus propionicus

full scientific name: Desulfobulbus propionicus Widdel 1981

strain designation: MUD

type strain: no

Culture and growth conditions

culture medium

  • @ref: 2714
  • name: DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194)
  • growth: yes
  • link: https://mediadive.dsmz.de/medium/194
  • composition: Name: DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194) Composition: Na2SO4 2.99103 g/l Na2CO3 1.49551 g/l Na-propionate 1.49551 g/l NaCl 0.997009 g/l KCl 0.498504 g/l MgCl2 x 6 H2O 0.398804 g/l Na2S x 9 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Folic acid 1.99402e-05 g/l Biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

culture temp

  • @ref: 2714
  • growth: positive
  • type: growth
  • temperature: 35

Physiology and metabolism

oxygen tolerance

  • @ref: 2714
  • oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

  • @ref: 2714
  • sample type: sludge, UASB digestor
  • country: Japan
  • origin.country: JPN
  • continent: Asia

isolation source categories

Cat1Cat2Cat3
#Engineered#Biodegradation#Anaerobic digestor
#Environmental#Terrestrial#Mud (Sludge)

Safety information

risk assessment

  • @ref: 2714
  • biosafety level: 1
  • biosafety level comment: Risk group (German classification)

Sequence information

GC content

  • @ref: 2714
  • GC-content: 59.0

External links

@ref: 2714

culture collection no.: DSM 6523

straininfo link

  • @ref: 73511
  • straininfo: 48228

literature

  • topic: Metabolism
  • Pubmed-ID: 19924895
  • title: Species-specific stable isotope fractionation of mercury during Hg(II) methylation by an anaerobic bacteria (Desulfobulbus propionicus) under dark conditions.
  • authors: Rodriguez-Gonzalez P, Epov VN, Bridou R, Tessier E, Guyoneaud R, Monperrus M, Amouroux D
  • journal: Environ Sci Technol
  • DOI: 10.1021/es902206j
  • year: 2009
  • mesh: Chemical Fractionation/*methods, *Darkness, Deltaproteobacteria/*metabolism, Mercury Isotopes/*chemistry, Methylation

Reference

@idauthorscataloguedoi/urltitle
2714Curators of the DSMZLeibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 6523)https://www.dsmz.de/collection/catalogue/details/culture/DSM-6523
20215Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M.10.1099/ijsem.0.004332List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ
73511Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J.10.60712/SI-ID48228.1StrainInfo: A central database for resolving microbial strain identifiers