Strain identifier
BacDive ID: 4006
Type strain:
Species: Desulfobulbus propionicus
Strain Designation: MUD
Strain history: <- M. Tasaki and Y. Kamagata, MUD
NCBI tax ID(s): 894 (species)
version 9 (current version)
General
@ref: 2714
BacDive-ID: 4006
DSM-Number: 6523
keywords: Bacteria, anaerobe
description: Desulfobulbus propionicus MUD is an anaerobe bacterium that was isolated from sludge, UASB digestor.
NCBI tax id
- NCBI tax id: 894
- Matching level: species
strain history
- @ref: 2714
- history: <- M. Tasaki and Y. Kamagata, MUD
doi: 10.13145/bacdive4006.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Desulfobacterales
- family: Desulfobulbaceae
- genus: Desulfobulbus
- species: Desulfobulbus propionicus
- full scientific name: Desulfobulbus propionicus Widdel 1981
synonyms
- @ref: 20215
- synonym: Desulfobulbus propionicus
@ref: 2714
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Desulfobacterales
family: Desulfobulbaceae
genus: Desulfobulbus
species: Desulfobulbus propionicus
full scientific name: Desulfobulbus propionicus Widdel 1981
strain designation: MUD
type strain: no
Culture and growth conditions
culture medium
- @ref: 2714
- name: DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194)
- growth: yes
- link: https://mediadive.dsmz.de/medium/194
- composition: Name: DESULFOBULBUS SP. MEDIUM (FRESHWATER) (DSMZ Medium 194) Composition: Na2SO4 2.99103 g/l Na2CO3 1.49551 g/l Na-propionate 1.49551 g/l NaCl 0.997009 g/l KCl 0.498504 g/l MgCl2 x 6 H2O 0.398804 g/l Na2S x 9 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Folic acid 1.99402e-05 g/l Biotin 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water
culture temp
- @ref: 2714
- growth: positive
- type: growth
- temperature: 35
Physiology and metabolism
oxygen tolerance
- @ref: 2714
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 2714
- sample type: sludge, UASB digestor
- country: Japan
- origin.country: JPN
- continent: Asia
isolation source categories
Cat1 | Cat2 | Cat3 |
---|---|---|
#Engineered | #Biodegradation | #Anaerobic digestor |
#Environmental | #Terrestrial | #Mud (Sludge) |
Safety information
risk assessment
- @ref: 2714
- biosafety level: 1
- biosafety level comment: Risk group (German classification)
Sequence information
GC content
- @ref: 2714
- GC-content: 59.0
External links
@ref: 2714
culture collection no.: DSM 6523
straininfo link
- @ref: 73511
- straininfo: 48228
literature
- topic: Metabolism
- Pubmed-ID: 19924895
- title: Species-specific stable isotope fractionation of mercury during Hg(II) methylation by an anaerobic bacteria (Desulfobulbus propionicus) under dark conditions.
- authors: Rodriguez-Gonzalez P, Epov VN, Bridou R, Tessier E, Guyoneaud R, Monperrus M, Amouroux D
- journal: Environ Sci Technol
- DOI: 10.1021/es902206j
- year: 2009
- mesh: Chemical Fractionation/*methods, *Darkness, Deltaproteobacteria/*metabolism, Mercury Isotopes/*chemistry, Methylation
Reference
@id | authors | catalogue | doi/url | title |
---|---|---|---|---|
2714 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 6523) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-6523 | |
20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |
73511 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID48228.1 | StrainInfo: A central database for resolving microbial strain identifiers |