General

@ref: 4880

BacDive-ID: 3961

DSM-Number: 13037

keywords: 16S sequence, Bacteria, anaerobe

description: Desulfobacter sp. ASv25 is an anaerobe bacterium that was isolated from marine sediment.

NCBI tax id

• NCBI tax id: 2294
• Matching level: species

strain history

• @ref: 4880
• history: <- C. Knoblauch, Max-Planck-Inst. Marine Microbiology, Bremen, Germany; ASv25 <- C. Knoblauch {1998}

doi: 10.13145/bacdive3961.20240510.9

Name and taxonomic classification

LPSN

• @ref: 20215
• description: domain/bacteria
• keyword: phylum/pseudomonadota
• domain: Bacteria
• phylum: Pseudomonadota
• class: Deltaproteobacteria
• order: Desulfobacterales
• family: Desulfobacteraceae
• genus: Desulfobacter
• species: Desulfobacter sp.
• full scientific name: Desulfobacter Widdel 1981

• synonyms

  • @ref: 20215
  • synonym: Desulfobacter

@ref: 4880

domain: Bacteria

phylum: Proteobacteria

class: Deltaproteobacteria

order: Desulfobacterales

family: Desulfobacteraceae

genus: Desulfobacter

species: Desulfobacter sp.

full scientific name: Desulfobacter sp.

strain designation: ASv25

type strain: no

Morphology

colony morphology

• @ref: 4880
• incubation period: >14 days

Culture and growth conditions

culture medium

• @ref: 4880
• name: DESULFOBACTER MEDIUM (DSMZ Medium 195)
• growth: yes
• link: https://mediadive.dsmz.de/medium/195
• composition: Name: DESULFOBACTER MEDIUM (DSMZ Medium 195) Composition: NaCl 20.9372 g/l Na2SO4 2.99103 g/l MgCl2 x 6 H2O 2.99103 g/l Na-acetate x 3 H2O 2.49252 g/l Na2CO3 1.49551 g/l KCl 0.498504 g/l Na2S x 9 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water

culture temp

• @ref: 4880
• growth: positive
• type: growth
• temperature: 10

Physiology and metabolism

oxygen tolerance

• @ref: 4880
• oxygen tolerance: anaerobe

Isolation, sampling and environmental information

isolation

• @ref: 4880
• sample type: marine sediment
• geographic location: Svalbard, Spitzbergen, Hornsund
• country: Norway
• origin.country: NOR
• continent: Europe

isolation source categories

taxonmaps

• @ref: 69479
• File name: preview.99_156100.png
• url: https://microbeatlas.org/index.html?action=taxon&taxon_id=90_40;96_3037;97_7840;98_63802;99_156100&stattab=map
• Last taxonomy: Desulfobacter hydrogenophilus subclade
• 16S sequence: AF099054
• Sequence Identity:
• Total samples: 113
• soil counts: 13
• aquatic counts: 92
• animal counts: 8

Sequence information

16S sequences

• @ref: 4880
• description: Desulfobacter sp. ASv25 16S ribosomal RNA gene, partial sequence
• accession: AF099054
• length: 1484
• database: nuccore
• NCBI tax ID: 84972

External links

@ref: 4880

culture collection no.: DSM 13037

straininfo link

• @ref: 73470
• straininfo: 49393

Reference