Strain identifier
BacDive ID: 3959
Type strain: 
Species: Desulfobacter sp.
Strain Designation: 3ac10
Strain history: <- F. Widdel, 3ac10
NCBI tax ID(s): 449304 (species)
version 9 (current version)
General
@ref: 680
BacDive-ID: 3959
DSM-Number: 2035
keywords: 16S sequence, Bacteria, anaerobe
description: Desulfobacter sp. 3ac10 is an anaerobe bacterium that was isolated from brackish water mud.
NCBI tax id
- NCBI tax id: 449304
- Matching level: species
strain history
- @ref: 680
- history: <- F. Widdel, 3ac10
doi: 10.13145/bacdive3959.20240510.9
Name and taxonomic classification
LPSN
- @ref: 20215
- description: domain/bacteria
- keyword: phylum/pseudomonadota
- domain: Bacteria
- phylum: Pseudomonadota
- class: Deltaproteobacteria
- order: Desulfobacterales
- family: Desulfobacteraceae
- genus: Desulfobacter
- species: Desulfobacter sp.
- full scientific name: Desulfobacter Widdel 1981
synonyms
- @ref: 20215
- synonym: Desulfobacter
@ref: 680
domain: Bacteria
phylum: Proteobacteria
class: Deltaproteobacteria
order: Desulfobacterales
family: Desulfobacteraceae
genus: Desulfobacter
species: Desulfobacter sp.
full scientific name: Desulfobacter sp.
strain designation: 3ac10
type strain: no
Culture and growth conditions
culture medium
- @ref: 680
- name: DESULFOBACTER MEDIUM (DSMZ Medium 195)
- growth: yes
- link: https://mediadive.dsmz.de/medium/195
- composition: Name: DESULFOBACTER MEDIUM (DSMZ Medium 195) Composition: NaCl 20.9372 g/l Na2SO4 2.99103 g/l MgCl2 x 6 H2O 2.99103 g/l Na-acetate x 3 H2O 2.49252 g/l Na2CO3 1.49551 g/l KCl 0.498504 g/l Na2S x 9 H2O 0.398804 g/l NH4Cl 0.299103 g/l KH2PO4 0.199402 g/l CaCl2 x 2 H2O 0.149551 g/l HCl 0.00249252 g/l FeCl2 x 4 H2O 0.00149551 g/l NaOH 0.000498504 g/l Sodium resazurin 0.000498504 g/l CoCl2 x 6 H2O 0.000189432 g/l Pyridoxine hydrochloride 9.97009e-05 g/l MnCl2 x 4 H2O 9.97009e-05 g/l ZnCl2 6.97906e-05 g/l p-Aminobenzoic acid 4.98504e-05 g/l (DL)-alpha-Lipoic acid 4.98504e-05 g/l Thiamine HCl 4.98504e-05 g/l Calcium D-(+)-pantothenate 4.98504e-05 g/l Riboflavin 4.98504e-05 g/l Nicotinic acid 4.98504e-05 g/l Na2MoO4 x 2 H2O 3.58923e-05 g/l NiCl2 x 6 H2O 2.39282e-05 g/l Biotin 1.99402e-05 g/l Folic acid 1.99402e-05 g/l H3BO3 5.98205e-06 g/l Na2WO4 x 2 H2O 3.98804e-06 g/l Na2SeO3 x 5 H2O 2.99103e-06 g/l CuCl2 x 2 H2O 1.99402e-06 g/l Vitamin B12 9.97009e-07 g/l Distilled water
culture temp
- @ref: 680
- growth: positive
- type: growth
- temperature: 30
Physiology and metabolism
oxygen tolerance
- @ref: 680
- oxygen tolerance: anaerobe
Isolation, sampling and environmental information
isolation
- @ref: 680
- sample type: brackish water mud
- geographic location: North Sea, Jadebusen
- country: Germany
- origin.country: DEU
- continent: Europe
isolation source categories
| Cat1 | Cat2 | Cat3 |
|---|---|---|
| #Environmental | #Aquatic | #Brackish |
| #Environmental | #Terrestrial | #Mud (Sludge) |
Sequence information
16S sequences
- @ref: 20218
- description: Desulfobacter sp. Vulgaris 16S ribosomal rRNA
- accession: M34415
- length: 1398
- database: nuccore
- NCBI tax ID: 2294
External links
@ref: 680
culture collection no.: DSM 2035
straininfo link
- @ref: 73468
- straininfo: 47535
Reference
| @id | authors | catalogue | doi/url | title | journal | pubmed |
|---|---|---|---|---|---|---|
| 680 | Curators of the DSMZ | Leibniz Institut DSMZ-Deutsche Sammlung von Mikroorganismen und Zellkulturen GmbH (DSM 2035) | https://www.dsmz.de/collection/catalogue/details/culture/DSM-2035 | |||
| 20215 | Parte, A.C., Sardà Carbasse, J., Meier-Kolthoff, J.P., Reimer, L.C. and Göker, M. | 10.1099/ijsem.0.004332 | List of Prokaryotic names with Standing in Nomenclature (LPSN) moves to the DSMZ | |||
| 20218 | Verslyppe, B., De Smet, W., De Baets, B., De Vos, P., Dawyndt P. | 10.1016/j.syapm.2013.11.002 | StrainInfo introduces electronic passports for microorganisms. | Syst Appl Microbiol. 37: 42-50 2014 | 24321274 | |
| 73468 | Reimer, L.C., Lissin, A.,Schober, I., Witte,J.F., Podstawka, A., Lüken, H., Bunk, B.,Overmann, J. | 10.60712/SI-ID47535.1 | StrainInfo: A central database for resolving microbial strain identifiers |